Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04131 ATGGTGAAGTTCTCAAAGCAGTTCGAGGGGCAACTCATTCCAGAATGGAAAGAGGCCTTTGTGGATTATTGGCAACTCAAGAAGGACCTCAAAAAACTCCATCTTTTTAATAACACCAACAACACACCCAACACTAGTACTACTTCTCTACCTAAGTACATATTTTCATCACTAAGGAACTACTCTCCATTTGGCCACCAACATAGACAGCATGGACCGATACAAGTCCATAGGAAACTTGCCTCGTCATCTTTTAATGGGGACATGTATGAGACAGAACTGCTAGATCAGTTTTCTGACACTGATGCCACCAAAGAATTTTTTGCATGTCTGGACCAGCAACTAAACAAGGTCAACAAGTTCTACAGAACCAAGGAGAAAGAGTTCATGGATAGAGGAGATTCCTTGAAAAAACAAATGGAAATCCTCCTTGTGCTCAAATCAACATTCAAGGAGCAGCAGAGCAAAGCAGGCTCTTCCCATGGCTCCAAGGAAGATCAATCCATCTCATGCACATTCTCTAATGAGGAGGACTCTGTTAGGAGCAGACCACAGCAAGAAGAACTACAGGACACAACAAGCACAGATGAATTGGAGAGAATTGAAGCTCCAATTTCTGATTCCCCTGGTGCAGAAGAACTTGCCAAGTCTTTACAAATGAAAAGAGAAGATGGTAAATTCAGAACACTTTCTGGCCGTGTCATCAACTGCCAAGGGAAGAATCTGAGGATAAACATTCCCTTGACCACACCATCCAGAACCTTTTCAGCCATAAGCTACCTTCTCAGGGAAGATTTGCTTAACCAGTCTTCAAGGAAATGTGGTCCAGAAGGTGGAAACATCCACCTGAACAAAACTAATTTGCACCATGCTGAAAAGATGATCAAAGGAGGTTTCATTGAGCTCTACAAAGGCCTAGGATATCTTAAAGTTTACAGGAACTTGAACATGCTTGCATTTATAAAGATTCTGAAGAAGTTTGATAAGGTCACAGAAAAACAAATTCTTCCCATTTATCTCAAAGTGGTTGAGAGTTCCTATTTCAATAGCTCAGATAAGGTGGTGAAGTTAGCAGACGAAGTTGAGGAACTGTTCATTAAAAATTTTGCTGAAGATAACCGAAGAAAGGCCATGAAATACCTTAGACCAAGCCAACGTAAAGAATCACATGCTGTAACTTTCTTCATTGGACTATTTACTGGATGCTTCTTGGCACTTCTTGCGGGATATGCTATAATGGCTCATGTGACTGGTTTGTATAGACCACATCAAAATTCTGTCTACATGGAAACTGTCTACCCTGTGCTTAGCATGTTCAGCCTTGTGTTCCTACATTTCTTTCTTTACGGTTGCAACATTCTTGCATGGAGAAAAACTCGTATAAACTACAGCTTCATTTTTGAGCTGGCCCCTACCAAGGAACTCAAGTATAGAGATATATTCTTAATTTGCACGATGGCAATGAGTACTGTGGTTGGTGTTACGTTTCTTCATTTGACTCTACTGACAAAAGGGTCATATGCCAAAGTACAAGACATTCCCGGACTTCTTCTTCTGGTTGTCATGCTGGATTTTTTCATGGCTGATCAACTTTGTAGTCAGGTGCCAATGCTCAGGAGCCTTGAGTACGTGGCATGTTACTATATAACTGGTAGCTATAAAACTCAGGACTATGGATATTGCATGAGGACAAAGCACTATAGAGATCTAGCTTATGCAGTGTCATTTCTCCCCTACTATTGGAGAGCTATGCAGTGTACTAGGAGATGGGTTGATGAAGGGCAGACAAGCCACCTTGTGAATCTGGGAAAATATGTATCAGCAATGTTAGCAGCTGGTGCCAAAGTGGCTTATGAGAAAGATGGGAGTGTAGTATGGCTCTGTGTTCTGGTGATAATGTCAAGTGCAGCAACTATGTACCAATTGTACTGGGACTTTGTAAAAGACTGGGGTTTGCTTCAAATGAATTCCAAGAATCCATGGTTAAGGAATGAATTAATGCTTCACAGAAAAGCCATTTACTACTTCTCAATGGGGTTAAATCTTGTTCTGAGGCTTGCTTGGTTGCAAACTGTTCTTCATTCAAGTTTTGAAAATGTTGACTATCGAGTTACATGCTTATTTTTAGCATCTCTTGAAGTTATTAGACGAGGGCTATGGAATTTCTTCAGATTGGAGAATGAGCATCTAAATAATGCTGGCAAGTTTAGAGCAGTGAAGATAGTACCACTTCCTTTTCATGAAGTTGATGAAGAAGACTAA 2262 0.4063 MVKFSKQFEGQLIPEWKEAFVDYWQLKKDLKKLHLFNNTNNTPNTSTTSLPKYIFSSLRNYSPFGHQHRQHGPIQVHRKLASSSFNGDMYETELLDQFSDTDATKEFFACLDQQLNKVNKFYRTKEKEFMDRGDSLKKQMEILLVLKSTFKEQQSKAGSSHGSKEDQSISCTFSNEEDSVRSRPQQEELQDTTSTDELERIEAPISDSPGAEELAKSLQMKREDGKFRTLSGRVINCQGKNLRINIPLTTPSRTFSAISYLLREDLLNQSSRKCGPEGGNIHLNKTNLHHAEKMIKGGFIELYKGLGYLKVYRNLNMLAFIKILKKFDKVTEKQILPIYLKVVESSYFNSSDKVVKLADEVEELFIKNFAEDNRRKAMKYLRPSQRKESHAVTFFIGLFTGCFLALLAGYAIMAHVTGLYRPHQNSVYMETVYPVLSMFSLVFLHFFLYGCNILAWRKTRINYSFIFELAPTKELKYRDIFLICTMAMSTVVGVTFLHLTLLTKGSYAKVQDIPGLLLLVVMLDFFMADQLCSQVPMLRSLEYVACYYITGSYKTQDYGYCMRTKHYRDLAYAVSFLPYYWRAMQCTRRWVDEGQTSHLVNLGKYVSAMLAAGAKVAYEKDGSVVWLCVLVIMSSAATMYQLYWDFVKDWGLLQMNSKNPWLRNELMLHRKAIYYFSMGLNLVLRLAWLQTVLHSSFENVDYRVTCLFLASLEVIRRGLWNFFRLENEHLNNAGKFRAVKIVPLPFHEVDEED 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04131 753 ProSiteProfiles EXS domain profile. 562 753 IPR004342 GO:0016020
Vimu7g04131 753 Pfam SPX domain 2 343 IPR004331 -
Vimu7g04131 753 MobiDBLite consensus disorder prediction 154 179 - -
Vimu7g04131 753 MobiDBLite consensus disorder prediction 154 212 - -
Vimu7g04131 753 ProSiteProfiles SPX domain profile. 2 341 IPR004331 -
Vimu7g04131 753 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 2 523 - -
Vimu7g04131 753 Pfam EXS family 522 730 IPR004342 GO:0016020
Vimu7g04131 753 CDD SPX_PHO1_like 3 337 IPR034092 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04131 Vimu-Chr7 39870230 39876044 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g04131 7 39870230 39876044 Vimu7g04131 7 39870230 39876044 ECH