Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04118 ATGACAGACATCACTGACGACATAGCGGAGGAAATTTCCTTCCAAGGCTTCGACGATGACTGCAATATGCTCGGAAGCCTTCTCAACGACATTTTGCAAAGAGAGGCTGGCCCAACCTTCGTTGACAAGCTTGAAAAAATTCGAGTCCTTGCTCAGAGTGCTTGTAATATGAGACATGCGGGGATTGAAAACATGGCTGAGCTGCTAGAGAAGCAATTGGCTTCAGAGTTATCCAAGATGACACTAGAAGAAGCTCTCACACTTGCTCGTGCCTTTAGCCATCATCTTACTTTGATGGGTATTGCTGAAACTCACCATAGGGTTCGCAAAGGAGGAAACATAGCTCTTTTTGCAAAATCTTGTGATGACATCTTCAACCAGCTGTTGCAAGATGGATTTACTACAGAGGAGCTTTATAACTCGGTTTGCAAGCAGGAGGTCGAAATTGTTCTCACAGCTCACCCCACTCAAATTAATCGTCGTACCTTGCAATACAAACACCTTAAAATTGCTCATCTTTTGGATTATAATGATCGACCTGATCTTGGCCCTGAAGACCGAGATATGTTGATTGAAGATCTGGTGAGAGAGATAACTTCAATATGGCTGACAGATGAACTTAGGCGTGAGAAACCCACACCAGTTGATGAAGCCAGGGCCGGGTTGAATATTGTGGAGCAATCACTCTGGAAAGCTGTTCCTCATTATTTACGTCGAGTTAGCAGCGCTTTAAAGAAGCACACAGGAAAACCACTTCCATTGACTTGCACACCAATAAAGTTTGGATCTTGGATGGGAGGTGATAGAGATGGAAACCCAAATGTGACAGCTAAGGTCTCAAAAGATGTTTCACTTCTGTCTAGATGGATGGCAATTGACCTCTACGTTCGGGAAGTGGATAGCCTGAAATTTGAGCTATCCATGAAACGGTGCAGCGATAAGTTGTCGAGATTGGCACATGAAATTCTAGAAGAAGCTAACAATGAGGAGAATCGCCGTGAGCATTGGAATGAATCTAGGAGTATAAGTCAATTCAAATATTCTAATCAACAAGCTTCACCACTTCCAACTAAACTTCCACCTGGAGCTCATTTACCGTCTTGTGCTGAAAAAGGTGGATCTGAGCATCCAAGACTCATTCCAGGAGCTGATCACAAGCAATTCCATCCCAAGGGTGGCGAGATTTCAAGTTCCACTGAGAGCACTATGTGCAGTACCAATGTCCGTTCACCAAAACTAATGTCACCAAGTTCCAGTGTTGCTTCATTAGCTTCAATATCACGCTCTCCTTCTTTCAACTCTAGTCAACAACTTCTTGCTCAGAGGAAATTGTTTGCAGAATCCCAGATAGGAAGGACCAGTTTCCATAGGCTTTTGGAGCCAAAGCTCCCTCAGCATCCTACAATCGCTCCTTATAGAGTTGTCCTTGGAAATGTAAAAGATAAGCTTCTGAGAACTCGTAGACGGTTGGAGCTTCTTCTCGAAGATGGTCCATGTGAACAAAATCCTATGAATTATTATGAAACAACAGATCAGCTCTTGGAACCTTTGCTCCTTTGCTATGAATCTTTGCAATCATGTGGATCTGGGGTGCTAGCTGATGGTCGACTTGCTGATCTGATAAGAAGAGTCACTACTTTTGGCATGGTGTTAATGAAGCTTGACTTGCGCCAGGAATCAGGCAGACATGCTGAAACGCTCGATGCAGTTACAAGGTATTTGGACTTGGGTACATACAGTGAGTGGGATGAAGAAAAGAAACTGAACTTCTTAACTCGAGAGCTGAAAGGGAAAAGACCACTGGTTCCCCCTAGTATAGAGGTTGTTCCAGATGTTAGAGAAGTCTTGGACACGTTCCGAACTGCTGCTGAGTTAGGAAGCGATTCATTTGGTGCCTATGTGATCTCTATGGCCTCAAATGCCAGTGATGTTCTTGCAGTAGAGCTTTTGCAGAAGGATGCACGACTTGCTGTCAGTGGAGAGTTAGGAAGAGCTTGTCCAGGTGGAACGCTGCGGGTGGTTCCTCTATTTGAAACTGTAAAGGACCTTAGAGGAGCTGGTTCAGTTATCAGAAAGCTTTTGTCAATAGATTGGTACCGACAACACATCATTAAAAACCATAATGGGCATCAAGAGGTTATGGTTGGGTATTCTGATTCTGGTAAAGATGCTGGGCGCTTCACTGCTGCTTGGGAACTTTACAAAGCTCAAGAAGATGTTGTAGCTGCATGCAAGGAGTATGGAATTAAGGTTACTCTCTTCCATGGCCGTGGAGGGAGTATTGGCCGCGGTGGTGGTCCGACATATATGGCCATTCAGTCTCAACCACCTGGCTCTGGAACCCTTCGTACAACAGAGCAAGGAGAGATGGTGCAGGCCAAGTTTGGCTTGCCACAAACAGCTGTTAGGCAACTTGAGATCTACACAACAGCTGTGTTACTTGCTACCCTTCGTCCTCCTCTCCCACCGCGTGAAGAAAAGTGGCGCAATATGATGGAAGAGATTTCAAAGCTCAGTTGCCAATGTTACCGTAGTGTAGTGTATGAAAATCCAGAATTTCTGTCATACTTCCATGAAGCCACCCCTCAATCAGAGCTTGGCTTCCTCAACATCGGTAGCCGCCCCACAAGGCGAAAGAGCACCACCGGAATTGGACACCTCCGTGCCATTCCCTGGGTGTTTGCATGGACTCAAACAAGGTTTGTTCTTCCAGCTTGGCTTGGAGTTGGAGCAGGGTTGAAAGGTGCTTGTGAGAAAGGACAAACTGAAGAGCTAAAGGCCATGTACAAAGAGTGGCCTTTCTTTCAAAGCACCATAGACTTGATTGAGATGGTTCTGGGAAAAGCAGACATTCCTATTGCAAGGCACTATGATGAAGTTCTTGTCTCAGAGAAGAGACAACAAATTGGAGGTCAACTGAGGGATGAACTCGTCCAAACTGGCAAGTTTGTGTTAGCTGTTAGTGGCCATGAGAAACCTCAGCAGAATAATAGGAGCTTGAGGAAACTGATTGAGAGTAGGCTTCCCTTCCTCAATCCCTTGAACATGTTGCAGGTTGAGATACTCAAGAGGCTAAGGAGTGATGATGACAACCTTAAAGCAAGAGATGCCTTGCTCATCACCATAAATGGCATTGCTGCTGGGATGAGGAACACTGGTTAA 3162 0.451 MTDITDDIAEEISFQGFDDDCNMLGSLLNDILQREAGPTFVDKLEKIRVLAQSACNMRHAGIENMAELLEKQLASELSKMTLEEALTLARAFSHHLTLMGIAETHHRVRKGGNIALFAKSCDDIFNQLLQDGFTTEELYNSVCKQEVEIVLTAHPTQINRRTLQYKHLKIAHLLDYNDRPDLGPEDRDMLIEDLVREITSIWLTDELRREKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSSALKKHTGKPLPLTCTPIKFGSWMGGDRDGNPNVTAKVSKDVSLLSRWMAIDLYVREVDSLKFELSMKRCSDKLSRLAHEILEEANNEENRREHWNESRSISQFKYSNQQASPLPTKLPPGAHLPSCAEKGGSEHPRLIPGADHKQFHPKGGEISSSTESTMCSTNVRSPKLMSPSSSVASLASISRSPSFNSSQQLLAQRKLFAESQIGRTSFHRLLEPKLPQHPTIAPYRVVLGNVKDKLLRTRRRLELLLEDGPCEQNPMNYYETTDQLLEPLLLCYESLQSCGSGVLADGRLADLIRRVTTFGMVLMKLDLRQESGRHAETLDAVTRYLDLGTYSEWDEEKKLNFLTRELKGKRPLVPPSIEVVPDVREVLDTFRTAAELGSDSFGAYVISMASNASDVLAVELLQKDARLAVSGELGRACPGGTLRVVPLFETVKDLRGAGSVIRKLLSIDWYRQHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACKEYGIKVTLFHGRGGSIGRGGGPTYMAIQSQPPGSGTLRTTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATLRPPLPPREEKWRNMMEEISKLSCQCYRSVVYENPEFLSYFHEATPQSELGFLNIGSRPTRRKSTTGIGHLRAIPWVFAWTQTRFVLPAWLGVGAGLKGACEKGQTEELKAMYKEWPFFQSTIDLIEMVLGKADIPIARHYDEVLVSEKRQQIGGQLRDELVQTGKFVLAVSGHEKPQQNNRSLRKLIESRLPFLNPLNMLQVEILKRLRSDDDNLKARDALLITINGIAAGMRNTG 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04118 1053 Pfam Phosphoenolpyruvate carboxylase 19 340 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vimu7g04118 1053 Pfam Phosphoenolpyruvate carboxylase 459 1053 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vimu7g04118 1053 MobiDBLite consensus disorder prediction 392 416 - -
Vimu7g04118 1053 MobiDBLite consensus disorder prediction 381 416 - -
Vimu7g04118 1053 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 18 1053 IPR015813 GO:0003824
Vimu7g04118 1053 Gene3D Phosphoenolpyruvate/pyruvate domain 289 351 - -
Vimu7g04118 1053 Gene3D Phosphoenolpyruvate/pyruvate domain 414 549 - -
Vimu7g04118 1053 Hamap Phosphoenolpyruvate carboxylase [ppc]. 9 1053 IPR022805 GO:0006099|GO:0008964|GO:0015977
Vimu7g04118 1053 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 1053 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vimu7g04118 1053 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 713 725 IPR033129 -
Vimu7g04118 1053 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 150 161 IPR018129 -
Vimu7g04118 1053 PRINTS Phosphoenolpyruvate carboxylase signature 202 218 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vimu7g04118 1053 PRINTS Phosphoenolpyruvate carboxylase signature 149 162 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vimu7g04118 1053 PRINTS Phosphoenolpyruvate carboxylase signature 261 276 IPR021135 GO:0006099|GO:0008964|GO:0015977
Vimu7g04118 1053 FunFam Phosphoenolpyruvate carboxylase 1 423 550 - -
Vimu7g04118 1053 Coils Coil 312 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04118 Vimu-Chr7 39689826 39701055 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g04118 7 39689826 39701055 Vimu7g04118 7 39689826 39701055 ECH