Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04114 GCTGCTTTCACTCTTTACCTCATGAGGAACTTCAAGGCTTTTGGTCATGCCATCATCGCTCTCTTCATCATCTCTCTGAGTGCTTGGTGTCATGGACAAGTAGAACTTGACAAAGCTCCTATGGAGAAGGCTGAGAAAGATGCTCTATTCTCCACCATTCAAGGTTTTGTTGGTAACTGGTGGAATGGCTCAGATCTCTATCCAGATCCTTGTGGTTGGACTCCTATTGAGGGGGTTTCTTGTGATCTGTTCGACGGATTTTGGTATGTTACTGTCTTGAACATTGGACCAATCTACGAGAATTCTCTAAGTTGTGCCAAAAATTTGGAGTTCAGACCACATTTGTTTGAGCTGAAGCACCTCAAATCTCTATCCCTATTCAAATGCTTTAGATCACAACGCAGGCATCAGGTTACAATCCCCAATGAAAACTGGGAAAATCTGGCTGGCAGCTTAAAATCACTTGAGTTTAGATCAAACACAGGTCTCATTGGAAAAATCCCTTCAAGTTTTGGTGTCATCAAGAAGCTTCAGTCCCTAGTACTGTTAGAAAATGGTTTAACAGGTGAAATTCCACCAGAGATTGGCAACCTGAACAAGTTGAAGCGGCTTGTCATTGCAGAAAACTATCTGAGTGGACACATTCCAGATATTTTTAGTGCACTGGGTGACTTGTTGATACTTGATTTGAGTAGAAACTCACTATCCGGGTCTTTACCTTTAACACTTGGATGCTTAACCTCCCTTTTGAAGCTTGATGTTAGCAATAACCATTTGGAGGGGAATTTGTTGAAAGAATTTGCTTATCTGAAGAATCTGACCCTTTTAGACCTTGGGAATAACAGATTCTCTGGTGGGTTGACAATGAGCATTCAAGAGATGTATTCTTTGGAGGAAATGGTTTTGTCCAACAATGCAATAGGTGGAGATATCAGGATCTTGAAGTGGGAAAACCTGCATAACTTGGTCAGTTTGGATCTCTCTAAAATGGGGTTAAACGGGGAAATTCCTGAGTCTATAACAGAATTGAAGAGGTTGAGATTTCTAGGCCTCAGTGACAACAACCTCACAGGAAACCTTTCACCAAAACTATCAACTCTTCCTTCTCTCAATGCACTCTATGTTAGTGGTAACAATCTTGCAGGAGAGCTTAAATTCTCTATGGAGTTTTATGGAAAATTGGGAACACGTTTTGGAGCCTGGAACAACCCCAACCTTTGTTGCCCTCTTGGAGCAATTGCAACAAGTAATGTTCCATTTGGGGTAAAACCATGCCAGCAGCAGATCAAATTGGTAGAATCTAACACAAATGCTGGTGATGTTAACAAGACTTTCTATTCCATAGCCTCTTTGTGCCATGCTCCTAATAATTTCTGGTGGACTTTTCCATTGATCATGATTCTCTTCCTAAATTCTTATATAATAGGTCTTTAA 1434 0.4079 AAFTLYLMRNFKAFGHAIIALFIISLSAWCHGQVELDKAPMEKAEKDALFSTIQGFVGNWWNGSDLYPDPCGWTPIEGVSCDLFDGFWYVTVLNIGPIYENSLSCAKNLEFRPHLFELKHLKSLSLFKCFRSQRRHQVTIPNENWENLAGSLKSLEFRSNTGLIGKIPSSFGVIKKLQSLVLLENGLTGEIPPEIGNLNKLKRLVIAENYLSGHIPDIFSALGDLLILDLSRNSLSGSLPLTLGCLTSLLKLDVSNNHLEGNLLKEFAYLKNLTLLDLGNNRFSGGLTMSIQEMYSLEEMVLSNNAIGGDIRILKWENLHNLVSLDLSKMGLNGEIPESITELKRLRFLGLSDNNLTGNLSPKLSTLPSLNALYVSGNNLAGELKFSMEFYGKLGTRFGAWNNPNLCCPLGAIATSNVPFGVKPCQQQIKLVESNTNAGDVNKTFYSIASLCHAPNNFWWTFPLIMILFLNSYIIGL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04114 477 FunFam Piriformospora indica-insensitive protein 2 313 414 - -
Vimu7g04114 477 Gene3D Ribonuclease Inhibitor 217 314 IPR032675 -
Vimu7g04114 477 Pfam Leucine rich repeat 200 259 IPR001611 GO:0005515
Vimu7g04114 477 PRINTS Leucine-rich repeat signature 246 259 - -
Vimu7g04114 477 PRINTS Leucine-rich repeat signature 225 238 - -
Vimu7g04114 477 Gene3D Ribonuclease Inhibitor 315 410 IPR032675 -
Vimu7g04114 477 Gene3D Ribonuclease Inhibitor 43 216 IPR032675 -
Vimu7g04114 477 PANTHER OS10G0469600 PROTEIN 246 384 - -
Vimu7g04114 477 FunFam Piriformospora indica-insensitive protein 2 216 312 - -
Vimu7g04114 477 SUPERFAMILY L domain-like 51 384 - -
Vimu7g04114 477 FunFam Piriformospora indica-insensitive protein 2 44 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04114 Vimu-Chr7 39652575 39654596 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g04114 151 434 Receptor kinase-like Gene Family AT1G73080 37.979 2.61e-33 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g04114 7 39652575 39654596 Vimu7g04114 7 39652575 39654596 ECH