Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g01554 ATGGGCACCCCCGATAAGAAAAGATCTGATTTTGTTGATGTAGTTAGGTCTTGGATCCCTCGAAGGACTGAGCCACCAAATGTGTCGAGGGACTTCTGGATGCCCGATCAGAGTTGTAGGGTATGCTATGAGTGTGATTCTCAGTTCACGATATTCAACCGCAGGCATCACTGTCGAATCTGTGGGCGAGTTTTCTGTGCAAAATGCACTGCCAATTTTGTTCCCGTGCCTTCAGATGAGCCAAATACTGTCCGTGAAGAGTGGGAGAAGATAAGGGTCTGTAACTATTGCTTTAAACAATGGGAAGGGTTAGCAACAGTTGATAATAATGGCAGTGCAGACCCTTCGTCCACCCCTTGTCTTAGCCCTTCACCATCTACAACAAGTTTGGTCAGCACTAAATCCAGTTGCACCTGTCATAGTAGCAGCAGCACTGCTGGTTCAGTTCCTTATACAACTGGGCCTTATCAGCGTGTGCCTTATAGTCCCTGTCAATCTTCGCAAATGAATCAGATAGCCGATGAACAAGATAATTTAAATTCTAGTAGGAGTTCAAATCCCTCCGAGGCTGTAGGGAATTTGACTTCTAACCAATTTGGCTACTGCTTCAACAGGAGTGATGATGAGGATGATGATTACGGTGTTTATCATTCGGATACAGAATCAAAACATTATTCTCATGCCCATGACTTTGAAGATCCAGTTAACATTAATGGAGTTGAATACGGGCCACATCAAATGCATCCTGACGAAGCTAGCATTCATGAAAAAAACTTGAGTAACCTAACGCCCCATCTTGATCTAGAAGGTATAGATGGAATTGAAGCACCCAGTAAAGAAGCTCATGAGCATGATCATGCTGATGGATGTGAACCTTCTCCTTATCATGAAGAGAGCAATAATACAGATCCTGTGGATTTTGAGAGTAATGGACTACTATGGCAACCTCCTGAGCCAGAAGATGAAGATGATGATAGGGAAGCTGTTCTTTTCGATGATGACGAGGATGAAGGTACTACTGGAGGTGGGGAATGGGGGTACCTACGGTCCTCCACTAGTTTTGGTTCTGGAGAATGTCGTAGCAGAGATAAAACAAGTGAGGATCATAGGAAAGCCATGAAGACTGTAGTGGAAGGGCATTTTAGAGCTCTGGTCGCTCAGCTCTTACAAGTGGAAAACCTAACTAGTGATGAAGATGGAAAAGAGAATTGGTTGGATATAATCACTGCTTTGTCATGGGAGGCTGCTACAATTCTGAAGCCCGATATGAGCAGAGGTGGAGGTATGGATCCTGGTGGATATGTAAAGGTTAAATGCATAGCTTGTGGACATCGAAATGAAAGCATGGTGGTTAAAGGAGTTGTATGTAAAAAGAATGTGGCTCATCGGAGAATGACATCAAAAATTGATAAACCTCGTTTTCTAATACTTGGAGGTGCTTTGGAGTATCAGCGTGTTTCTAACCAGTTATCAAGTGTTGATACTTTGTTACAGCAGGAGATGGACCATTTGAAGATGGCAGTTGCAAGGATTGATGCTCATCACCCCAATGTGCTTTTGGTGGAGAAATCAGTATCTCGTTATGCCCAAGAGTACCTCCTAGCTAAAGACATATCACTTGTTCTGAATATCAAAAAGCCACTTTTAGAGCGCATTGCCCGTTGCACTGGTGCACAGATTGTCCCTTCAATTGATCATTTGACCTCTCAAAAGTTGGGATATTGCGAAACATTCCATGTGGACAAATTTTTTGAGGAGCATGGTAGTGCTGGGCAGGGTGGGAAGAAATCAACAAAGACTTTGATGTTCTTTGAGGGTTGCCCGAAACCTTTAGGTTGCACCATCTTGCTGAAGGGTGCTAATGGGGATGAGTTGAAGAAGGTGAAACATGTGATCCAATATGGAGTCTTCGCAGCCTATCACCTGGCACTAGAGACATCTTTTCTGGCCGATGAAGGTGCTTCACCACTAGAGTTTCCTTTGAAATCTCCCATAACTGTTGCATTACCAGATAAACCATCTAGTATTGTGAGATCCATTTCCACTATCCCTGGGTTTTCTGTTCTCTCTGCTAGAGAGTCTCAAGGAGCAAAACCTTTTGAAATACCAAAATCTGATGACATGCACAAGACTGAAACATCTAGCTGCAGTGAGTCCACTGAAAGATCTTTGGTCGATAACTCAATCCAGCTGCATGAATTCTCAGGAGAGGCCATCCAATCAGCCCAGGATATGCCACCTTCCCTCTGCGAAAGTTTCCTTTTGAACACTGCTTCTAAGGAGGATGATTCTTTTGGAACCTTTGACTCTTCACAACAAGATGGCAATGGCTACCTCAGAGCTGCAGCATTGTACGCTAATCAAGGCCCTAGCCCTGGACCACCATATGTAAAACATGATAGTAGTAATAACAATAATGATCATGAGGACATGATACATTCAAACGAAGATTTTCCTCCCTCAACTTCAGACCATCAGAGTATTTTAGTCTTTTTATCAACACGTTGTGTGTGGAAAGGAACTGTTTGTGAAAGGTCCCATCTTGTCAGAATTAAATACTATGGAAGTTCTGATAAGCCTTTGGGACGGTTCTTGAGAGATCAACTACTTGATCAGAGTTACACCTGCTGCTCATGTGAGTTGCCGCCAGAAGCTCATGTTCACTGTTATACTCATCGGCAAGGCAGCCTGACAATTTCTGTTAAGAAACTATCAGATTTTGCTTTACCAGGAGAACGAGAAGGTAAAATTTGGATGTGGCACAGGTGCTTGAAATGTCCTCGTGTAAATGGTTTTCCTCCTGCTACACGGAGGGTAGTTATGTCTGATGCTGCTTGGGGCTTATCCTTTGGGAAATTTTTGGAGCTGAGTTTCTCAAATCATGCAGCAGCAAGCAGGGTTGCAAGTTGTGGTCATTCGCTTCACAGAGATTGTTTAAGATTCTATGGTTTTGGGAAGATGGTTGCCTGCTTTCGTTATGCTTCAATTCACCTGCATTCTGTTTATCTTCCCCCACCTAAACTTGAATTTGTCAACTATGATAGGCAGGACTGGCTACAAAAAGAAGCTTATGAGCTGCATGACAAGGCTGAATTACTGTTTAGTGAAGTGTACACCGTTCTGCATCAACATTCAGAGAAGGTTTCAGGTCTCGTGTTGCAGGAGGGTGGACATAAGGTGTCAGATTTTAGGAATCTAGCTGTGAAACTTAAAGAAACGCTGCAGTATGAGAAAGAAGAATTTGAGAACTCACTACGAAAATGGCTGCACAGAGAAGACAAAGCTGAACAGCCTGCGATTGATATTCTAGAGCTCAATAAGTTGCGGAGGCATATCCTAATCCAGTCTTATATTTGGGACCAGCGCTTGATATATGCATCCAATTTAAGTAAAATTATTCTTCAAGAAAGTTCCAAGATTTTAAATCATAGAGAGAAGTTGCCTGGTCCTAGGGAAAAACTTGTTGAAGCAGATATTGCTACTAGACCAGCAAGAGGCCATAGCAGTTGTGATTCCTTTCTTTTGGAAACAAAACCTGATGGAAACCTAAATTTAGAAAATTCTAGCTACCTTAGTCACCCTGGTGAGGTGATTAAAATTGAGGACAAGGTTAAAGATACAAATCATGATAAGGTTGACCTTTCTTTCTCTGGTGGTGCAAATATCAACGATAGATCTGATTCTGTAGAATTCGAGATGTCTGTAAGGAGGGCTTTGTCAGAGGGAGAATCTTCTGTTGTGGCCAACTTATCTGATACCCTTGATGCAGCATGGACAGGTGAAAGTCACCCTACAATTTCATCAGTCAAAGAAAACGGTTGTCTGTCTCCTGATATGGTTGTTCATTCACCTGTTGCAAATTCAGTTACATCAAAATCAAATTCTGATAACTATAATGCTGATATAGATGGGATTGAGGCAGGATGCACTAATTACTCTAAATTACTTACCAAAGGACTTGATACTAAATGGAAAGCAATGCCTTTTGCAGACTTCTTTGGTTCATTCGACAAAACTTCCTCTTTCAATATACAGAAGCTTGTTGAGTATAACCCAGTCCATATTTTATCATTTCGAGAGGTGGAGCGCCAGACTGGTGCTAGATTGCTTCTGCCAGCCGGAACTAATGATACCATAGTTCCCGTTTATGATGATGAACCCACTAGTGTCATAGCGTATGTGCTTGTGTCAGTGGATTATCATATGCAAATGTCAGAATTTGATAGACCAAAAGACAGTGGAGATAGTTCAATTGCATTGCCACTCTTTGATTCAAGTATACTTTCTCTCAACTCTTTTGATGAGACAATTACTAATACATACAGAAGTATTGGCTCTTTTGATGAGGGCATGTTATCCACTGGGTCTCGGAGTCTACCGGCTGGGGATCCACTCTCATACACAAAGGATTTTCATGCAAGGGTTTCTTTTACTGATGATAGCAACCTTGGGAAAGTGAAATATACTGTAACTTGCTACTATGCTAAGAGATTTGAGGCTTTAAGAAGAACTTGTTGCCCTTCTGAGTTAGATTTTGTGAGGTCCCTCAGCCGTTGTAAGAAGTGGGGAGCTCAGGGAGGAAAGAGCAATGTTTTCTTTGCGAAAACCCTGGATGATAGGTTCATTATCAAGCAGGTTACAAAAACAGAGCTGGAGTCATTTACCAAGTTTGCACCAGCTTATTTTAAGTATTTATCTGAGTCAATCAGTACAGGAAGCCCAACCTGTCTTGCGAAGATCTTGGGAATTTATCAGGTAACATCTAAGCACCTCAAAGGAGGGAAGGAAACAAAAATGGATGTTTTGGTTATGGAAAATCTTCTTTACAGAAGAAACATTAGACGGCTTTATGACCTCAAAGGTTCTTCCCGATCACGGTACAATCCAGATACAAGTGGGAGCAATAAAGTGCTACTGGATCAGAATCTCATTGAAGCTATGCCAACCTCTCCAATATTTGTTGGTAACAAGGCAAAGCGGTTGCTGGAGAGGGCAGTGTGGAATGATACTGCCTTCCTTGCCTCAATATATGTTATGGACTACTCATTGTTGGTTGGGGTGGATGAGGAAAAACATGAGCTGGTATTAGGTATAATTGATTTTATGAGGCAGTATACATGGGATAAGCACCTCGAAACATGGGTGAAGACCTCAGGCATCCTTGGTGGACCCAAGAATACTTCTCCAACTGTTATATCACCGCAGCAGTACAAGAAACGGTTTAGGAAAGCCATGAGTTTATATTTTCTTATGGTGCCAGATCAATGGTCTCCTTCAGAGTTACACCCCAGTGGATCCCAATCTGACATTTATGACGAAAATGCTTAA 5328 0.421 MGTPDKKRSDFVDVVRSWIPRRTEPPNVSRDFWMPDQSCRVCYECDSQFTIFNRRHHCRICGRVFCAKCTANFVPVPSDEPNTVREEWEKIRVCNYCFKQWEGLATVDNNGSADPSSTPCLSPSPSTTSLVSTKSSCTCHSSSSTAGSVPYTTGPYQRVPYSPCQSSQMNQIADEQDNLNSSRSSNPSEAVGNLTSNQFGYCFNRSDDEDDDYGVYHSDTESKHYSHAHDFEDPVNINGVEYGPHQMHPDEASIHEKNLSNLTPHLDLEGIDGIEAPSKEAHEHDHADGCEPSPYHEESNNTDPVDFESNGLLWQPPEPEDEDDDREAVLFDDDEDEGTTGGGEWGYLRSSTSFGSGECRSRDKTSEDHRKAMKTVVEGHFRALVAQLLQVENLTSDEDGKENWLDIITALSWEAATILKPDMSRGGGMDPGGYVKVKCIACGHRNESMVVKGVVCKKNVAHRRMTSKIDKPRFLILGGALEYQRVSNQLSSVDTLLQQEMDHLKMAVARIDAHHPNVLLVEKSVSRYAQEYLLAKDISLVLNIKKPLLERIARCTGAQIVPSIDHLTSQKLGYCETFHVDKFFEEHGSAGQGGKKSTKTLMFFEGCPKPLGCTILLKGANGDELKKVKHVIQYGVFAAYHLALETSFLADEGASPLEFPLKSPITVALPDKPSSIVRSISTIPGFSVLSARESQGAKPFEIPKSDDMHKTETSSCSESTERSLVDNSIQLHEFSGEAIQSAQDMPPSLCESFLLNTASKEDDSFGTFDSSQQDGNGYLRAAALYANQGPSPGPPYVKHDSSNNNNDHEDMIHSNEDFPPSTSDHQSILVFLSTRCVWKGTVCERSHLVRIKYYGSSDKPLGRFLRDQLLDQSYTCCSCELPPEAHVHCYTHRQGSLTISVKKLSDFALPGEREGKIWMWHRCLKCPRVNGFPPATRRVVMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVACFRYASIHLHSVYLPPPKLEFVNYDRQDWLQKEAYELHDKAELLFSEVYTVLHQHSEKVSGLVLQEGGHKVSDFRNLAVKLKETLQYEKEEFENSLRKWLHREDKAEQPAIDILELNKLRRHILIQSYIWDQRLIYASNLSKIILQESSKILNHREKLPGPREKLVEADIATRPARGHSSCDSFLLETKPDGNLNLENSSYLSHPGEVIKIEDKVKDTNHDKVDLSFSGGANINDRSDSVEFEMSVRRALSEGESSVVANLSDTLDAAWTGESHPTISSVKENGCLSPDMVVHSPVANSVTSKSNSDNYNADIDGIEAGCTNYSKLLTKGLDTKWKAMPFADFFGSFDKTSSFNIQKLVEYNPVHILSFREVERQTGARLLLPAGTNDTIVPVYDDEPTSVIAYVLVSVDYHMQMSEFDRPKDSGDSSIALPLFDSSILSLNSFDETITNTYRSIGSFDEGMLSTGSRSLPAGDPLSYTKDFHARVSFTDDSNLGKVKYTVTCYYAKRFEALRRTCCPSELDFVRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFTKFAPAYFKYLSESISTGSPTCLAKILGIYQVTSKHLKGGKETKMDVLVMENLLYRRNIRRLYDLKGSSRSRYNPDTSGSNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIYVMDYSLLVGVDEEKHELVLGIIDFMRQYTWDKHLETWVKTSGILGGPKNTSPTVISPQQYKKRFRKAMSLYFLMVPDQWSPSELHPSGSQSDIYDENA 1775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g01554 1775 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 446 619 - -
Vimu7g01554 1775 SUPERFAMILY GroEL apical domain-like 447 619 IPR027409 -
Vimu7g01554 1775 SMART PIPK_2 1459 1750 IPR002498 GO:0016307|GO:0046488
Vimu7g01554 1775 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 24 109 - -
Vimu7g01554 1775 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1425 1749 IPR002498 GO:0016307|GO:0046488
Vimu7g01554 1775 MobiDBLite consensus disorder prediction 699 716 - -
Vimu7g01554 1775 CDD PIPKc_PIKfyve 1486 1749 IPR044769 GO:0000285
Vimu7g01554 1775 Gene3D - 1608 1750 - -
Vimu7g01554 1775 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1525 1691 IPR002498 GO:0016307|GO:0046488
Vimu7g01554 1775 Pfam TCP-1/cpn60 chaperonin family 388 647 IPR002423 GO:0005524
Vimu7g01554 1775 MobiDBLite consensus disorder prediction 345 359 - -
Vimu7g01554 1775 CDD Fab1_TCP 382 653 - -
Vimu7g01554 1775 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Vimu7g01554 1775 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1454 1606 IPR027484 -
Vimu7g01554 1775 Gene3D GroEL 446 619 IPR027409 -
Vimu7g01554 1775 MobiDBLite consensus disorder prediction 160 193 - -
Vimu7g01554 1775 MobiDBLite consensus disorder prediction 279 368 - -
Vimu7g01554 1775 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 1451 1606 - -
Vimu7g01554 1775 SUPERFAMILY FYVE/PHD zinc finger 31 104 IPR011011 -
Vimu7g01554 1775 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 22 1759 - -
Vimu7g01554 1775 SMART fyve_4 28 103 IPR000306 GO:0046872
Vimu7g01554 1775 MobiDBLite consensus disorder prediction 789 814 - -
Vimu7g01554 1775 SUPERFAMILY SAICAR synthase-like 1462 1749 - -
Vimu7g01554 1775 MobiDBLite consensus disorder prediction 317 340 - -
Vimu7g01554 1775 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1608 1750 - -
Vimu7g01554 1775 Pfam FYVE zinc finger 33 101 IPR000306 GO:0046872
Vimu7g01554 1775 MobiDBLite consensus disorder prediction 699 722 - -
Vimu7g01554 1775 MobiDBLite consensus disorder prediction 279 293 - -
Vimu7g01554 1775 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 105 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g01554 Vimu-Chr7 14670572 14679917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g01554 1 1775 EF-hand Containing Proteins AT3G14270 57.531 0.0 1905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01554 7 14670572 14679917 Vimu7g01554 7 14670572 14679917 ECH
Vimu7g01554 7 14670572 14679917 Vimu11g02587 11 45975847 45982589 PCT