Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00906 ATGGCACAAGATACTGTTTTTGGTGCTGACTCACCTCGACGACGTCTATTGCGAGATCAAGTTCAAGTTGTTAAAAGAAAGGATTCTGATCGCTTCGAAATTGTTCCTATCCAAGATTCCCTGTCATTTGAGAAAGGATTTTTCATATTCATTCGTGCGTGCCAATTACTGGCTCAAAAGAACGATGGAATCATATTAGTAGGAGTTGCAGGTCCATCTGGAGCAGGGAAAACTGTTTTCACTGAGAAGATCCTCAATTTTATGCCAAGCATAGCTGTCATAACAATGGACAATTATAACGATTCTAGTAGAATTATTGATGGAAACTTTGATGACCCTCGGTTGACGGATTATGATACCTTGCTTGAAAATATACAGGGTCTTAAAGCAGGGAAGCCTGTTCAAGTTCCAGTATATGATTTCAAGTCTAGTTCTCGCATAGGTTACAGGACTATTGAAGTCCCTAGCTCTCGTATTGTAATCATAGAAGGCATCTATGCCTTAAGTGAAAAATTAAGACCTTTACTTGATCTTCGTGTTTCTGTCACTGGTGGAGTTCATTTTGACCTTGTTAAGCGTGTATTACGGGACATTCACCGTGCTGGTCAAGAGCCTGAAGAAATAATTCATCAAATCTCTGAAACGGTATATCCTATGTATAAAGCTTATATTGAGCCAGATCTCCAAACAGCACATATAAAAGTCATAAACAAGTTTAATCCATTCTCTGGATTTCAAAATCCCACATATATATTGAAGTCAGCAAGAACTGTGACAGTTGATCAAATCAAGGAAATTATTGCTGCACAGCATACTGAAATCAAAGAGGAAACGTATGACATATTTCTTCTACCGCCTGGGGAAGACCCTGAAGCTTGTCAATCATATTTGAGAATGAGAAACCGCGATGGAAAGTACAATCTCATGTTTGAGGAATGGGTGACAGATAGTCCATTCATAATATCTCCTCGAATTACTTTTGAGGTCAGTGTGCGCCTTCTTGGAGGGCTGATGGCCTTAGGATACACAATTGCATCTATCCTGAAAAGAAGCAGCCATATCTTTCGTGATGATAAAGTGACCATTAAAACTGATTGGTTGGAACAACTGAATCGCACATATGTTCAGGTGCAAGGGAAAGACAGGAATTATTGCAAGTTTGTAGCAGAGAAACTGGGGTTGGATGGTTCCTATGTTTCTCGCACTTATATTGAACAAATTCAGCTAGAAAAGCTTGTGAACGATGTGATGGCATTGCCAGACGATCTTAAGTCAAAACTCAGCATAGATGATGACGTAGTTTCAAGCCCCAAAGAAGCCCTTTCCAGGGCTTCTGCAGATAGAAGAATGAAGTATCTTAATCGTGGTATTTCACACTCATATTCGACTCAAAGGGACAAGATTCTACCTAAGCTGACTAAACTTGCTATAAATAACAGAAGATTCGATGGAAGAACTCTGGAATCACCTGCATCGATTGCTAACCATGGGGTCATCACTCAACTTTCTGATCAAATTTCCACATTAAATGAAAGAATGGATGAATTCACCTCCCGTATTGAAGAATTGAATTCAAAGTTTGCTAGCAAAAAAGTTTCGGCCAGTCAACAAAACTTGGCTTCACAGGCTGAGGCCGGTAATGGCTCAGGCCCTACTTCCTTGTTTGTAACTGGATTAGGCAATGGTTCATTGACTGGATCATTGCTGCCTAATTCTTCATCATCTTCTCAATTGGCGAAAGAGTCTCCCCTGATGGACGAGGTATTAGTTATTGCACGGGGACAACGTCAAATCATGCATCAACTTGACACTCTGAGCAATCTTTTGCATGAATACTTTGGAGAACGGTCACGCCTTGGAAGACCAAATCAGACAGGTAGAATGCGAGAACCTGATTCTATTGCCATCCCTGTGGTTCTGACTCTGGTCATTGGTGTTGTTGGTGTGTTTTTGTTCAAGAGTGTGACATCCCAGAAGTAG 1980 0.4056 MAQDTVFGADSPRRRLLRDQVQVVKRKDSDRFEIVPIQDSLSFEKGFFIFIRACQLLAQKNDGIILVGVAGPSGAGKTVFTEKILNFMPSIAVITMDNYNDSSRIIDGNFDDPRLTDYDTLLENIQGLKAGKPVQVPVYDFKSSSRIGYRTIEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIHRAGQEPEEIIHQISETVYPMYKAYIEPDLQTAHIKVINKFNPFSGFQNPTYILKSARTVTVDQIKEIIAAQHTEIKEETYDIFLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIASILKRSSHIFRDDKVTIKTDWLEQLNRTYVQVQGKDRNYCKFVAEKLGLDGSYVSRTYIEQIQLEKLVNDVMALPDDLKSKLSIDDDVVSSPKEALSRASADRRMKYLNRGISHSYSTQRDKILPKLTKLAINNRRFDGRTLESPASIANHGVITQLSDQISTLNERMDEFTSRIEELNSKFASKKVSASQQNLASQAEAGNGSGPTSLFVTGLGNGSLTGSLLPNSSSSSQLAKESPLMDEVLVIARGQRQIMHQLDTLSNLLHEYFGERSRLGRPNQTGRMREPDSIAIPVVLTLVIGVVGVFLFKSVTSQK 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00906 659 CDD UMPK_like 66 238 - -
Vimu7g00906 659 PRINTS Uridine kinase signature 223 236 - -
Vimu7g00906 659 PRINTS Uridine kinase signature 64 81 - -
Vimu7g00906 659 PRINTS Uridine kinase signature 187 197 - -
Vimu7g00906 659 PRINTS Uridine kinase signature 131 146 - -
Vimu7g00906 659 PANTHER URIDINE KINASE 17 421 - -
Vimu7g00906 659 Pfam Phosphoribulokinase / Uridine kinase family 67 235 IPR006083 GO:0005524|GO:0016301
Vimu7g00906 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 234 IPR027417 -
Vimu7g00906 659 SUPERFAMILY CYTH-like phosphatases 258 406 IPR033469 -
Vimu7g00906 659 Gene3D - 65 249 IPR027417 -
Vimu7g00906 659 Pfam CYTH domain 270 403 IPR023577 -
Vimu7g00906 659 ProSiteProfiles CYTH domain profile. 247 409 IPR023577 -
Vimu7g00906 659 Coils Coil 499 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00906 Vimu-Chr7 8816270 8824437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00906 66 233 PRT Gene Family AT5G40870 26.554 4.14e-17 82.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00906 7 8816270 8824437 Vimu7g00906 7 8816270 8824437 ECH
Vimu11g02611 11 46346280 46359952 Vimu7g00906 7 8816270 8824437 PCT