Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00323 ATGTCAACTTTGAGCATACCTCCAGTGATACCATCACCTCGAGAAGATGCTGTCAAGCTGCATAAAGCTTTCAAAGCAATGTCACTTTGGCTGCATGATCCTCCAACTAGGGATGCTAAGATAGTGAGAAAAGCCTTAAGACCAGGAGTTTCTGATAATCAAGCTTTAACAGAAAGTATATGTTCTCGTACTCCATCACAACTTAGACGATTAAAAGAAGTTTATCAGTCAAATTATCATTCCTCTCTTGAGACAGATATTGAAATCCAACTAAGTGGTGATCATAAAAAGGCAATAAAGAAAGAAACATCTGGCTCTTTTCGATATGGCCTTTTGACCATACTGCGTTGTGCTACTGATCCTGCTTTATACTTTGCTAAGATCTTGCGGAAGTCAATGAAGGGTGTGGGAACTCAAGATAGTAGACTAATAAGGGTAGTTGTGACAAGGACAGAGGTAGACATGTACCATATAAAAATAGCATATTATAAGAAATATGGAAAACCATTAACTCATGCTGTTCGTTCTGACACATCAGGCCATTACAAAGAATTTCTCTTGAGTCTTATAGGTTCCGATTATTAG 585 0.3795 MSTLSIPPVIPSPREDAVKLHKAFKAMSLWLHDPPTRDAKIVRKALRPGVSDNQALTESICSRTPSQLRRLKEVYQSNYHSSLETDIEIQLSGDHKKAIKKETSGSFRYGLLTILRCATDPALYFAKILRKSMKGVGTQDSRLIRVVVTRTEVDMYHIKIAYYKKYGKPLTHAVRSDTSGHYKEFLLSLIGSDY 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00323 194 ProSitePatterns Annexin repeat signature. 137 189 IPR018252 GO:0005509|GO:0005544
Vimu7g00323 194 PANTHER ANNEXIN 19 96 - -
Vimu7g00323 194 SMART annex3 137 189 IPR018502 GO:0005509|GO:0005544
Vimu7g00323 194 SMART annex3 51 114 IPR018502 GO:0005509|GO:0005544
Vimu7g00323 194 Pfam Annexin 124 189 IPR018502 GO:0005509|GO:0005544
Vimu7g00323 194 Pfam Annexin 37 99 IPR018502 GO:0005509|GO:0005544
Vimu7g00323 194 FunFam Annexin 120 192 - -
Vimu7g00323 194 ProSiteProfiles Annexin repeat profile. 33 116 IPR018502 GO:0005509|GO:0005544
Vimu7g00323 194 SUPERFAMILY Annexin 2 193 IPR037104 GO:0005509|GO:0005544
Vimu7g00323 194 Gene3D Annexin 121 193 IPR037104 GO:0005509|GO:0005544
Vimu7g00323 194 Gene3D Annexin 33 99 IPR037104 GO:0005509|GO:0005544
Vimu7g00323 194 ProSiteProfiles Annexin repeat profile. 120 191 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00323 Vimu-Chr7 3858288 3863082 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00323 7 3858288 3863082 Vimu7g00323 7 3858288 3863082 ECH