LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu7g00296	ATGGAGAAAAGCTTAAAAGTTCTCTGGGTTATTTCCATAATGATAACCCATCAATTAGCATTCTTGGTCAATGCCTCACATTCTAAAAAGAAGATTGTGCCAGCTTTGTACGTTTTTGGTGATTCAACTGTAGATGCAGGAAACAACAACAATCTCAACACACTTGCCAAGGCAAATGCATTTCCCTATGGCATTGACTTCAATAATTGTTCCACAGGAAGGTTTAGCAATGGAAAAACCTTTGCTGACCTTATTGCTATTAGATTGGGTTTGCCAATGCCATCTCCATACTTGGGTGTTCCTAAGTCTGAGAGACATCAAGTAGTCACAGGAATTAACTATGCATCAGGCTCTTGTGGAATCTTGAATTCAACCAGATCAGGAGATTGTTTGTCTTTAGACAAACAAATTGAATACTTCACCTCAACCGTGGACAACGATCTTCCAAGAAGCATACATAGCAAAACAAAACTAAGGCATTACTTAGCCAATTCTATATATCTCTTATCAATTGGATCTAATGATTACATGTTGAATTATTTCAAGTACCCAAATGGAACCAATAACAATCTAAATCCAGAAAAATATGCAGATTACCTACTTAGACATTTGGCTTCACATATCAAGAAAATTTATGATCTTGGAGCTCGAAAGTTTGTGGTAAGTAGAATTGGTCAAATTGGATGCACACCAATATGTGTTATAAGGACACCAGATTCTCAAGAATGCAATGAAGATATAAATCAAAAGATTAAATACTACTCAGACAAACTCCCTGGGAAGCTACAAGAAAAAGCCGCGTTTCCAGCGGGATTATCGCTGGAGAAGTTTGATAGTGGCTAA	843	0.3701	MEKSLKVLWVISIMITHQLAFLVNASHSKKKIVPALYVFGDSTVDAGNNNNLNTLAKANAFPYGIDFNNCSTGRFSNGKTFADLIAIRLGLPMPSPYLGVPKSERHQVVTGINYASGSCGILNSTRSGDCLSLDKQIEYFTSTVDNDLPRSIHSKTKLRHYLANSIYLLSIGSNDYMLNYFKYPNGTNNNLNPEKYADYLLRHLASHIKKIYDLGARKFVVSRIGQIGCTPICVIRTPDSQECNEDINQKIKYYSDKLPGKLQEKAAFPAGLSLEKFDSG	280

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu7g00296	280	Pfam	GDSL-like Lipase/Acylhydrolase	36	262	IPR001087	GO:0016788
	Vimu7g00296	280	Gene3D	SGNH hydrolase	23	279	IPR036514	-
	Vimu7g00296	280	PANTHER	GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED	16	263	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu7g00296	Vimu-Chr7	3575391	3578539	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu7g00296	32	258	Acyl Lipid Metabolism Gene Families	AT4G10950	37.395	4.02e-39	139

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu7g00296	7	3575391	3578539	Vimu7g00296	7	3575391	3578539	ECH