Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00254 ATGCCACCGACACTCTCATTCACACTTACACACTACCTCACGTTGTTGGTGGCGGTGCTGTTAGTCGTCGTCGAAGCAAATTTGCCGGCAACCGGAATCGCCAGCGAGCTTCCGACGTTCCGCGAAGCGCCGGCATTCCGCAACGGAAGAGAATGCCGCAACCGAGCACACGGAGAGTCCGTCTTCCACATCGCGATGACGCTGGACGCGACCTACCTCCGCGGATCCATCGCTGGCGTGTTCTCCGTGCTGCAACACACGTCGTGTCCGGAGAACGTTGTATTCCACTTCATCGCTACCACGCACAGACGGGCGGAGCTCCGGCGCATAATAACGACGACGTTCCCGTACCTAGCCTTCCACCTCTACCACTTCGACGCGAACCTCGTGCAGGGCAAGATCTCGTACTCTATCCGTCGTGCACTGGACCAGCCGCTGAACTACGCGCGGATGTATCTAGCTGACTTGCTTCCGGCGAAAGTCCGGCGAATTATCTACTTCGATTCCGATCTCATCGTCGTCGACGACGTGGCAAAGCTCTGGAGAATCGACCTCCACTCCCGCGTGCTGGGCGCGCCCGAATACTGCCATGCCAACTTCACCAATTACTTCACGCATCGCTTCTGGTCGAACCCGAGCTACGCGGCGTCGTTTAAGGGACGCGAAGCGTGCTACTTCAACACCGGTGTGATGGTGATTGATCTGTGGAAGTGGCGCGAGGGAAGATACACGGAAAAGCTCGAGACCTGGATGCGTATCCAGAAGCGGAACCGGATCTACGAGCTCGGATCGTTGCCACCATTTCTGCTTGTGTTCGCCGGTGATGTGGAGCGCGTGGAGCACCGTTGGAACCAGCACGGTCTCGGCGGCGACAATCTCGAAGGTCTCTGTCGTGACCTTCATCCCGGTCCGGTGAGCCTCCTCCACTGGAGCGGCAAGGGGAAGCCGTGGCTGCGAATCGATTCCAAGAAGCCTTGTCCATTGGACAGTCTTTGGGCGCCGTACGATCTCTTTCGCCACTCTCCCTCGTTGTTCTCCGATTCGTAG 1047 0.5826 MPPTLSFTLTHYLTLLVAVLLVVVEANLPATGIASELPTFREAPAFRNGRECRNRAHGESVFHIAMTLDATYLRGSIAGVFSVLQHTSCPENVVFHFIATTHRRAELRRIITTTFPYLAFHLYHFDANLVQGKISYSIRRALDQPLNYARMYLADLLPAKVRRIIYFDSDLIVVDDVAKLWRIDLHSRVLGAPEYCHANFTNYFTHRFWSNPSYAASFKGREACYFNTGVMVIDLWKWREGRYTEKLETWMRIQKRNRIYELGSLPPFLLVFAGDVERVEHRWNQHGLGGDNLEGLCRDLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRHSPSLFSDS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00254 348 Pfam Glycosyl transferase family 8 63 320 IPR002495 GO:0016757
Vimu7g00254 348 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 63 329 IPR029044 -
Vimu7g00254 348 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 13 340 - -
Vimu7g00254 348 FunFam Hexosyltransferase 63 326 - -
Vimu7g00254 348 SUPERFAMILY Nucleotide-diphospho-sugar transferases 63 340 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00254 Vimu-Chr7 3141381 3142427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00254 30 348 Glycosyltransferase AT1G13250 77.914 0.0 508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00254 7 3141381 3142427 Vimu7g00254 7 3141381 3142427 ECH