Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00211 ATGGATCAAGAAGATGGCAAGATTGACCCAGTTAATCCTATTGATCTGTCTTCTAATCCTCCCGCATCAGGGAAAGATGAGATGATGGGCATTGAGAATTATCTGTCATCTGGAAAGGATGATATGCTTTGTTCTGAGAATCCTCCATCTTCAAGAAAAGATGTTGTGATGGGTAATGAGTATCCTCCAAAAGTGTCGTCTAATTCTATGTCATTAGAAAAAGATGGTACGGTGGGCACTGTAAATCCTACTGAAGTGTCTTCCAATACCATGCTTTTGATAAAAGATGATAGCGCTGATAATCCTCTGTTATCTGGAAAAGATTGTGCTGAGAATCCTCCTGACTTGTCTTCTAATTCTCCAACGTCAGGAAGAAATGGCATAATGGGCACTGCGAATTCTCTGTCTCCGGGAAAACATGATATATTGACCACTGAGAATATTCCTGAAGTAACTTTTGGTCATCCTTCTTCTGGAAAAGATGATGGAAAGAAGGATATTGATTCTCCTGAAGGAACTAGTATATCAGATTTGAGTGACAAGAATACCCCGCAATCATTGAAGGCAAAACCTAGTATTGTTAAGAAATCTCAAACTGGTAAACTTAAGGGGAAGAAGAGCAATGTTTCTCAAAAGATTAATAAGAAAAGAAGAATCACGACATCTAAAAAAGTGGTGGATAATGCTGGTGAGAAACAAGTTTCAGACCTTAGTGAGCTCAAGGAAATTAATGATGAACCATTTAAGGGTAAGGGTGAGGAGGCTGAAAATAAAATAAAAGAAAGCCAAAATAAGAGCACTGCTGACAAAAGTCCGAAGGAAGAGTCAGACAGTAGCCAACTGAAGGTTACTGATCCTCCTGAAGGATCTAGTAAACCAGAGTTGAGTAACAAGAGTACTCCACAATCATTGAAGGCAAAATCTAAAATTGTTAAGAAATCTCAGGCTGGTAAACTAAAGGCTAAGAAGAACATTGGCACTCAGCAGATTCATGGCAAAAGAATTAGTATTTCCAAAAAAGTGTTGGATAATGCAGATGAGAAACAAATTTCAGACAGTAGCCACCTGAAGGAAACTGATAATGAACCACTGAAGGGGAAGAGTCAGGAGGTTGAAGAGAAAGTAACAGAAAGCCAAAACAGGAGCACCAATGGCAAAAGTCGTAGGGAGAAGATACGACAGGCTCGTAAAGATAAGACTAGTCAGTTGGATAAGATTGAGCAAAATCTAGAGAGTGAAGAGAAGCATAGGGACTCAAGCAAGGGTTCTAGGAGTATAAAAAACAAAGTTAGGAGAAGTGGCATGGAAAGGAGTCAAGTAGATGACAAGAAGGCTGAAAAGCTTGGTGGTTTCATCTTTATGTGCAATGCAAAGACAAAGCCTGATTGTTTTCGCTATCGAGTCATGGGTGTTTCAGCTGGTAAAAAGGATGATGTTTTACAAATCAGACCTGGGCTTAAGCTTTTTCTTTATGATTTTGATCTGAAGCTACTGTATGGTATTTACAAGGCTTCATCTTCTGGTGGCATGAAGCTTGAACCCAAAGCTTTTGGTGGCAAATTTCCTGCTCAGGTGCGGTTCAAAATTGCTGGTGATTGTTTCCCACTACCCGAGAGCATTTTCAAAAAAGCCATCAAGGATAATTATAATGAAAAAAACAAGTTCAGAACAGAACTTACTGTTAGACAAGTGAGGAAGCTCACTCAACTTTTCCGACCAGTTGAAATTCCTTCAGCTGTGCGCCCTGTCCACTCCCAGCCAAAGCTAATAATTCGAGATAGGGAATCTCCCGACAATGTTAGGGGATCGCGGTCCCGGTTGCAGAGGGAAAACTATAACGTGCAGTCTCTTCATAGGGATCATCAATTTGACCTACAAGAGGAAATTGCTCATGATCTGTTTCTAATGGATAACAATCGAGCATATGGTCTACCAAGGTATAGAAGGAATGTGGCTACAACATCTCATGTTAATCCTATGTTAGAATCTTCTGATAGAGACTATCAACCCCATCACCTGGAGCATGGCTACCCGAGAATTGTTCCTGCTCATGTAGAAAGTGTTCGGACTGATCATCTTTATTTAAATGACAGTAGGGATTCTCTGTTTCTGAATGACAGTAGGGATCCTTATCATGTCTATCGCCATGGTGTTTCACCTAGGGATGCATATTTGGGATCTTTAAGTAGGGAGGAAAACTCTTACTTGGTTGGGCGAAGAACTTTTGCGGGGACGGATAACTTACCAAGGAGAGAGGCTGAACGAGATAGGCATTACCCAATCTACGCTGCACCTGATGCTTTCTCTGATCATATTCGGCGGCCATATCATGGAGACAAGTTGGAAGCTTCACGCGCCCCAGTTTCTTCTCGTTACTCTTTTGCTGGTCCTTCATTACGTCGCCGCTGA 2409 0.4105 MDQEDGKIDPVNPIDLSSNPPASGKDEMMGIENYLSSGKDDMLCSENPPSSRKDVVMGNEYPPKVSSNSMSLEKDGTVGTVNPTEVSSNTMLLIKDDSADNPLLSGKDCAENPPDLSSNSPTSGRNGIMGTANSLSPGKHDILTTENIPEVTFGHPSSGKDDGKKDIDSPEGTSISDLSDKNTPQSLKAKPSIVKKSQTGKLKGKKSNVSQKINKKRRITTSKKVVDNAGEKQVSDLSELKEINDEPFKGKGEEAENKIKESQNKSTADKSPKEESDSSQLKVTDPPEGSSKPELSNKSTPQSLKAKSKIVKKSQAGKLKAKKNIGTQQIHGKRISISKKVLDNADEKQISDSSHLKETDNEPLKGKSQEVEEKVTESQNRSTNGKSRREKIRQARKDKTSQLDKIEQNLESEEKHRDSSKGSRSIKNKVRRSGMERSQVDDKKAEKLGGFIFMCNAKTKPDCFRYRVMGVSAGKKDDVLQIRPGLKLFLYDFDLKLLYGIYKASSSGGMKLEPKAFGGKFPAQVRFKIAGDCFPLPESIFKKAIKDNYNEKNKFRTELTVRQVRKLTQLFRPVEIPSAVRPVHSQPKLIIRDRESPDNVRGSRSRLQRENYNVQSLHRDHQFDLQEEIAHDLFLMDNNRAYGLPRYRRNVATTSHVNPMLESSDRDYQPHHLEHGYPRIVPAHVESVRTDHLYLNDSRDSLFLNDSRDPYHVYRHGVSPRDAYLGSLSREENSYLVGRRTFAGTDNLPRREAERDRHYPIYAAPDAFSDHIRRPYHGDKLEASRAPVSSRYSFAGPSLRRR 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00211 802 Pfam Development and cell death domain 449 571 IPR013989 -
Vimu7g00211 802 MobiDBLite consensus disorder prediction 1 84 - -
Vimu7g00211 802 MobiDBLite consensus disorder prediction 62 84 - -
Vimu7g00211 802 SMART dcd 446 573 IPR013989 -
Vimu7g00211 802 MobiDBLite consensus disorder prediction 157 171 - -
Vimu7g00211 802 Coils Coil 389 416 - -
Vimu7g00211 802 ProSiteProfiles DCD domain profile. 446 573 IPR013989 -
Vimu7g00211 802 MobiDBLite consensus disorder prediction 336 441 - -
Vimu7g00211 802 MobiDBLite consensus disorder prediction 282 309 - -
Vimu7g00211 802 MobiDBLite consensus disorder prediction 234 281 - -
Vimu7g00211 802 MobiDBLite consensus disorder prediction 112 141 - -
Vimu7g00211 802 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED 282 798 - -
Vimu7g00211 802 MobiDBLite consensus disorder prediction 172 193 - -
Vimu7g00211 802 MobiDBLite consensus disorder prediction 97 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00211 Vimu-Chr7 2624168 2626743 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02199 11 38435862 38439362 Vimu7g00211 7 2624168 2626743 PCT