LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu7g00194	TTGCATAGCATAAGATACGACACCGTCTCACCATCTTCTTCGCTGCACCCATCCAGCATGTTTTTCTCTGTGTCTACTGGTTCTTCTGCGGCATTGTCTTTGCCACTCAGATGCAATGCCAAAATCTCTTCTCAACGGGTTGTTGCTGCTGATGCCTTCCCTTCCTTTCTCCCCAGAGAAATGCACACCATTGAAGACCCTTTTGCCAGAAAATTCGCCATGCGGATTCAGAGGCTACCTGTGCCTGTAAATATTTCATCTTTTTACTTTCTTCAGTTCCTTGCCTCTTCCTTTGGTATTCTGCATACTGTTTTTGCATCTTTGTTGTGTAAAGTTAAAAGGGTTAGGTTCTCAGAAAATCCCATCATGAGTAGCTGTGTGAAGCCAATGGTGCAGAGCAAGGAAACTCCAGTTGTTCTTCTACATGGTTTTGACAGCTCTTGTTTAGAATGGAGATATGTGTTACCATTGCTTGAGGAATCTGGTATTGAGACCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAAACTTCCTCCATGTGATGTGGTATCAAAGCGTGACCACTTCTACCAGTTTTGGAAATACTACATCAGAAGGCCAATGACATTAGTTGGACCAAGCCTTGGCTCTGCTGTTGCCATTGACTTTGCAGTCAATTATCCCGAAGCTGTGGAGAAGCTTGTTCTGATTGGTGCTAGTGTATATGCAGAGGGAACTGGAAAGCTGGCAACCTTACCCAGATCAGTAGCCTATGCTGGGGTTAATTTATTGAAGAGCTTTCCGTTACGCCTTTATGCCACCTATTTGACCTTCACAAACATTCCCTTCAGCACTAGCCTTGATTGGACTAATGTTGGTCGGTTGCATTGTTTATTGCCTTGGTGGAATGATGCTACTGTGGATTTTATGACAAGTGGTGGTTACAATGTTTCTCCTTTGATAGGAAAGGTAAAGCAGAAAACACTGATAATATGGGGTGAAAATGACCGCATCATCAGCAATAAATTTGCGGTGCAACTCCACTGTGAATTACCTGATGCAACAATTCGCCAAATACCTCATTGTGGTCATCTTCCTCATCTAGAAAGACCAGACTCTACCATCAAATTAATTGTTGAATTTGTGCAGAGAGAAGAGGCTAAGCAATTGAACCCATATGTTGCAAAAGTTTGA	1185	0.4278	MHSIRYDTVSPSSSLHPSSMFFSVSTGSSAALSLPLRCNAKISSQRVVAADAFPSFLPREMHTIEDPFARKFAMRIQRLPVPVNISSFYFLQFLASSFGILHTVFASLLCKVKRVRFSENPIMSSCVKPMVQSKETPVVLLHGFDSSCLEWRYVLPLLEESGIETWAIDILGWGFSDLEKLPPCDVVSKRDHFYQFWKYYIRRPMTLVGPSLGSAVAIDFAVNYPEAVEKLVLIGASVYAEGTGKLATLPRSVAYAGVNLLKSFPLRLYATYLTFTNIPFSTSLDWTNVGRLHCLLPWWNDATVDFMTSGGYNVSPLIGKVKQKTLIIWGENDRIISNKFAVQLHCELPDATIRQIPHCGHLPHLERPDSTIKLIVEFVQREEAKQLNPYVAKV	394

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu7g00194	394	PRINTS	Epoxide hydrolase signature	142	160	IPR000639	GO:0003824
	Vimu7g00194	394	PRINTS	Epoxide hydrolase signature	356	378	IPR000639	GO:0003824
	Vimu7g00194	394	PRINTS	Epoxide hydrolase signature	162	177	IPR000639	GO:0003824
	Vimu7g00194	394	PRINTS	Epoxide hydrolase signature	221	234	IPR000639	GO:0003824
	Vimu7g00194	394	Gene3D	alpha/beta hydrolase	128	388	IPR029058	-
	Vimu7g00194	394	PANTHER	HYDROLASE	34	382	-	-
	Vimu7g00194	394	Pfam	Alpha/beta hydrolase family	138	371	IPR000073	-
	Vimu7g00194	394	SUPERFAMILY	alpha/beta-Hydrolases	136	380	IPR029058	-
	Vimu7g00194	394	PRINTS	Alpha/beta hydrolase fold signature	207	220	IPR000073	-
	Vimu7g00194	394	PRINTS	Alpha/beta hydrolase fold signature	325	339	IPR000073	-
	Vimu7g00194	394	PRINTS	Alpha/beta hydrolase fold signature	162	177	IPR000073	-
	Vimu7g00194	394	PRINTS	Alpha/beta hydrolase fold signature	221	234	IPR000073	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu7g00194	Vimu-Chr7	2382307	2388249	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu7g00194	7	2382307	2388249	Vimu7g00194	7	2382307	2388249	ECH
	Vimu11g02284	11	39673199	39682577	Vimu7g00194	7	2382307	2388249	PCT