Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00076 ATGTTGGCCTCCACACTCCTACCTCCCTCCAAGCTCCTCCCTTCGCATTTCGTCCCTCCCATCACCGTTGCAGAAGCTCCTCTGAGAAACAGAGTCGCAATCTTTTCCAAATCCACCCCTAAACTCGCTTTCGTTGCCAGGGCCACCAATGACGCCCGTGACGGCACCGTTGACGCAACCTCTTCGCCGGGTGTTGATGCAGTAACAAGTACATCTTCTGGCCTTGGTGATGGTTATGTGGCTTTGTTTGTTCGTATGTTAGGCCTTGATCGTGATCCTCTGGATAGAGAACAAGCTATAATTGCTCTTTGGAAGTATTCACTCGGTGGAAAGAAGTGCATAGATACTATAATGCAGTTTCCTGGTTGTATTAATCTTGTTGTGAACCTCCTCAGATTAGAGTCTACGTCAGCATGCGAGGCAGCTGCAGGCCTTCTGCGATCATTGTCTTCAGTCAATCTGTATAGAAATTTTGTAGCTGAAAGTGGAGCGATAGAAGAGATAAACAGATTGCTGAGACAATCTTCCTTGACTTCTGAGGTAAAGGAGCAGAGTTTGACTACACTCTGGAATTTATCTGTTGATGAGAAGCTTTGGATTAAAATTTCAAAGAGTGAGATCCTTCCTGTAGCTATTAAGTACCTTGAAGATGAGGACATTAAAGTGAAGGAGGCTGCAGGGGGCATTTTGGCAAATTTAGCACTGAGTCGTGTTAACCACAGCATCATGGTTGAAGCGGGTGTTATACCAAAATTGGCAAAGTTCTTAAGATCTAATCTGGAAGGATCTAAAGTTCTTAGGAAGGAAGCAAGGAATGCATTGTTAGAACTTTTTAAGGACAATGATTATAAAATTCTTGTTATGGAGGAAGGTCTGGTTCCTGTCCCATTAATTGGTGCTGCAGCCTTTAAGTCATTCAACCCAGGCTTACATTTGTGGCCCACATTACCTGATGGTACAGAAATTGAAAGGACTTCTAGACAGCCATCACCATTTGGTGCTTCAGAATTACTTCTTGGATTAAATATTGATGACAAGAATGCTAACTTAGAGGAAGCAAAGGTCAGTGCAATGATTGGACGAAGCCAACAGCAATTCCTTGCTCGTGTTGGAGCCTTAGAAATGGAAGAAAAAACTATTCCTAATTCTGATTGCTCAAATGATCAGAGGTTTACACTTTTACCTTGGATGGATGGTGTTGCTCGTTTAGCACTGATATTAGAACTGGAAGATAAGTCTGCATCAATAAAGGCTGCAGAGTCAATTGCCACTGCATGTATCAATGAACATATGCGTATTGCATTCAGGGAGGCTGGAGTAATTAAGCATTTAATAAGGCTTTTGAACTGTGATGACAATGCAGTCCAGTTGGCGGTAACACAAGCTTTGGAAAGGCTGTCTGTTAGCGATATTGTTTGCCAGGTAATTGAAACTGAAGGGGTTTTAGGTCCTTTAGTTAGTATTTTGAAATGCTCGGGGACCATGGGAACTATTGTGGAAAAGTCTTTGAGTATACTAGCAAGGATATTTGACCTCAGTAAACAAAAGCAACTGGAGTTAATGGATTTGAGAAGGCACTTGGTGGAGCAAAAAATGACTGTTTCAACCAGGTTTAGTAGTACTGAACAAATTGTATCAAAAACATTCTCAAGGAATAATATACTGGATTCTGTTTTCATTGCACACCTTGTTGAGATTCTGAAGTCCTCTCCACCCAATTTACAAGGAAAAGCTGCTTCTATTGTACTCTCTGTACGTAAAAATATTAACTCAATATCTTACGCCTATGCAGGGGACATGGAATCTGATGCAGAAGATCAGTTTTATGAAGCATATGCAATAGAATTTGAAGAAGCTGGTCTGGCAATATCTGCAGCATCACGATTATTGACTATACTACTCGATTGCGAGCAGTTCCGCAACAAAATAAATGCCCCCTACTTCATTGATATGCTTCGCGAAATCCTCAAGTCCAATATTCCTCTCCGCAGCAAAGATTCGGTAGTTGCATGCCTACTTAAACTGAGTTCTTTCTCTGCCTCCATCACCAGTGTCTATCCAATCAACGTGGAAGTTACACTTTACGAGACAATCCCAAGACTTGTAGAACAGATCAAAACTTCATTCTCCCCAGAAGCACAAGAAACTGCTGTTGTAGAACTGAATAGAATAATATCTGAAGGAGTGGTAGATTCCACAGACGAAGCTATTATTTCAGAGGGGGCAATAAGTTCATTGGTGAAGCTGATTGAAGAAGGTAGTGAAAGGGCTGTTGAAGCAAGCTTGGCAATACTGTACAATCTGAGTAAGAACAATGAGAACCACTCAGTACTGGTGACTGCCGGAGCCCTGCAGGTCTTAAAAAGAATTGTTCTTGCAAACAGACCACACTGGGAACGGGCACTTCTTTTACTCAGGATTTTGCAACCCTGA 2433 0.4192 MLASTLLPPSKLLPSHFVPPITVAEAPLRNRVAIFSKSTPKLAFVARATNDARDGTVDATSSPGVDAVTSTSSGLGDGYVALFVRMLGLDRDPLDREQAIIALWKYSLGGKKCIDTIMQFPGCINLVVNLLRLESTSACEAAAGLLRSLSSVNLYRNFVAESGAIEEINRLLRQSSLTSEVKEQSLTTLWNLSVDEKLWIKISKSEILPVAIKYLEDEDIKVKEAAGGILANLALSRVNHSIMVEAGVIPKLAKFLRSNLEGSKVLRKEARNALLELFKDNDYKILVMEEGLVPVPLIGAAAFKSFNPGLHLWPTLPDGTEIERTSRQPSPFGASELLLGLNIDDKNANLEEAKVSAMIGRSQQQFLARVGALEMEEKTIPNSDCSNDQRFTLLPWMDGVARLALILELEDKSASIKAAESIATACINEHMRIAFREAGVIKHLIRLLNCDDNAVQLAVTQALERLSVSDIVCQVIETEGVLGPLVSILKCSGTMGTIVEKSLSILARIFDLSKQKQLELMDLRRHLVEQKMTVSTRFSSTEQIVSKTFSRNNILDSVFIAHLVEILKSSPPNLQGKAASIVLSVRKNINSISYAYAGDMESDAEDQFYEAYAIEFEEAGLAISAASRLLTILLDCEQFRNKINAPYFIDMLREILKSNIPLRSKDSVVACLLKLSSFSASITSVYPINVEVTLYETIPRLVEQIKTSFSPEAQETAVVELNRIISEGVVDSTDEAIISEGAISSLVKLIEEGSERAVEASLAILYNLSKNNENHSVLVTAGALQVLKRIVLANRPHWERALLLLRILQP 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00076 810 Gene3D - 533 805 IPR011989 -
Vimu7g00076 810 Gene3D - 76 304 IPR011989 -
Vimu7g00076 810 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 163 196 IPR000225 GO:0005515
Vimu7g00076 810 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 52 809 - -
Vimu7g00076 810 Pfam Armadillo/beta-catenin-like repeat 428 467 IPR000225 GO:0005515
Vimu7g00076 810 SUPERFAMILY ARM repeat 625 796 IPR016024 -
Vimu7g00076 810 SMART arm_5 195 235 IPR000225 GO:0005515
Vimu7g00076 810 SMART arm_5 110 151 IPR000225 GO:0005515
Vimu7g00076 810 SMART arm_5 684 726 IPR000225 GO:0005515
Vimu7g00076 810 SMART arm_5 236 279 IPR000225 GO:0005515
Vimu7g00076 810 SMART arm_5 428 468 IPR000225 GO:0005515
Vimu7g00076 810 SMART arm_5 730 770 IPR000225 GO:0005515
Vimu7g00076 810 SMART arm_5 152 194 IPR000225 GO:0005515
Vimu7g00076 810 Gene3D - 397 530 IPR011989 -
Vimu7g00076 810 SUPERFAMILY ARM repeat 83 511 IPR016024 -
Vimu7g00076 810 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 741 783 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00076 122 249 U-box Gene Family AT2G23140 32.812 1.44e-07 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00076 7 963447 977719 Vimu7g00076 7 963447 977719 ECH