Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00023 ATGGCAACGTTACAGTGCAACTGCAATTCTATTGCGCTCAACAAACCCTGCTACCCCACACGAAGAAGACTCTTATTACAACCCTTTTCTTCATCTACCCGCTTGGTTTCAAGAACTTCAATTTGCACTAGTTACAAGGCCTCAACTTCAAGGTGGGGTAGTGTTGTTTCTGCTGTTGTCTCAGAAGAGAACGCTGTTGGCTCTACTTTCTCTCCAGCTGATGTCTTCAAACTCACATATTTAGAGGGAAACAGTTGGCTCTGGAGTGTGGGTGGGACAAACATATTGGTTGATCCAATTTTGGTTGGTAACTTGGATTTTGGAATTCCTTGGCTATATGATGCTGCTAAGAAAGTGTTAAAGCAATTCCAGCTCAGTGATCTTCCGGAAATCAGTTGCTTACTCATTACTCAAAGCCTTGATGATCACTGCCACTTGAAGACCTTAAAGCCCTTCTCTCAGAAATTCCCAAATATTAGAGTTATAGCAACCCCTAATGCCAAAGGCTTGTTGGATCCTCTTTTCAGAAATGTTACGTATTTAGAACCTGGGCAGAGCTCTGATATTGAAACAAATTATGGTTCCAAGATCAATATTAAGGCTACAGCAGGACCAGTTCTTGGACCTCCTTGGCAACGTCCTGAGAATGGCTTAACAGGGAGTGTCAATAGCCCAAAAAGGGACGTGCAGAGCTTGACAAAGATGTTGGAGGTCATAAGGGTGATGAACCTAGAGATGGAAGTTGTCATGGAGAAGAAACTCAAAGAAAAAGATAAGGAGATATCGTGTCTAGGGAAGCTCAATTGGATGCTTCAAGAAAGAGTGAAGAATCTCAGCACAGAGAACCAAATATGGAGAGAGTTGGCACAAAATAATCTGAAAGAGGTGCCTACAAATGTTAGCAAGGAGAACTACTATCATAATGAAGTAGCCATTGACAAGTTGAATTTCGGAAACAACAATATTGGAGTGAGACCTCCTGCACCTGCACCTGAACCAGCAAAACAGCCTGCACCTACACCTGCACCTGAACCAGCAAAACAGCCTCCCGCACCTGCACCTGAACCAGCAAAACAGCCTGCACCTGCACCTGATGGAGGCGGAAAGTTTGGGAAAAATATGGTATATTCAAGGAAAGAAAAGGCCATTCCAGGATCCAGCAATGTCCAAGAATCCAACCCACCGTTACTGCATGAGACTTTAATGGCTTTGTGCTGTTTATGTCATAGGTATCTTGTTACATCCCCCCAAGGTCAATTGTCTCTCTACTACGAAGCCCACTGTGTATATAATCAAAGTTACATTGAGAAGGAAAAGGCAGATATTGTAATAACGCCAGTCATAAAACAGCTTTTGCCCAATTTTACCTTGGTTTCAGGACAAGAAGATGCAGTGAAACTTGCAAAGCTGCTTCAAGCCAAGTTCGTTGTGCCAATGAAAAATGGAGACCTGGATAGCAAAGGGCTTCTTGCCAGCTTAGTTAGTGGTGAAGGAACAGTCGAATCATTCAAGGAACTTTTATCAAAAGAATTACCAGATGCAAAGGTTGTAGAACCTACTCCAGGAGTACCAGTGGAAATTTCAGCAAATTAA 1593 0.4281 MATLQCNCNSIALNKPCYPTRRRLLLQPFSSSTRLVSRTSICTSYKASTSRWGSVVSAVVSEENAVGSTFSPADVFKLTYLEGNSWLWSVGGTNILVDPILVGNLDFGIPWLYDAAKKVLKQFQLSDLPEISCLLITQSLDDHCHLKTLKPFSQKFPNIRVIATPNAKGLLDPLFRNVTYLEPGQSSDIETNYGSKINIKATAGPVLGPPWQRPENGLTGSVNSPKRDVQSLTKMLEVIRVMNLEMEVVMEKKLKEKDKEISCLGKLNWMLQERVKNLSTENQIWRELAQNNLKEVPTNVSKENYYHNEVAIDKLNFGNNNIGVRPPAPAPEPAKQPAPTPAPEPAKQPPAPAPEPAKQPAPAPDGGGKFGKNMVYSRKEKAIPGSSNVQESNPPLLHETLMALCCLCHRYLVTSPQGQLSLYYEAHCVYNQSYIEKEKADIVITPVIKQLLPNFTLVSGQEDAVKLAKLLQAKFVVPMKNGDLDSKGLLASLVSGEGTVESFKELLSKELPDAKVVEPTPGVPVEISAN 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00023 530 Gene3D - 76 224 IPR036866 -
Vimu7g00023 530 MobiDBLite consensus disorder prediction 326 361 - -
Vimu7g00023 530 Pfam Beta-lactamase superfamily domain 411 480 - -
Vimu7g00023 530 Pfam Beta-lactamase superfamily domain 77 217 - -
Vimu7g00023 530 PANTHER METALLO-HYDROLASE/OXIDOREDUCTASE SUPERFAMILY PROTEIN 33 219 - -
Vimu7g00023 530 MobiDBLite consensus disorder prediction 317 372 - -
Vimu7g00023 530 SUPERFAMILY Metallo-hydrolase/oxidoreductase 69 190 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00023 Vimu-Chr7 249457 268455 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00023 7 249457 268455 Vimu7g00023 7 249457 268455 ECH