Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00007 ATGACTATGACACCTGGGGACACACCTTCATTTTGTAAAAGACCATACTCCAATATTTGCATACCGGTGGCTGTATTGGCAGCAGTACCTGGTAAAGGAGGAGGGTTGCTTGAAAAGCCAGTTATTGAGAAAGTCACCCCCGGCCGGGAGTCTGAATTTGATTTGAAGAAATCACGGAAAACAGCACCACCCTATCGTGTAATATTGCACAACGACAACTTTAATAAACGGGAATATGTTGTTCAAGTACTGATGAAGGTCATCCCCGGAATGACCCTTGATAATGCAGTTAATATCATGCAAGAAGCGCATTACAATGGATTGTCAGTAGTGATTATCTGTGCACAATCTGATGCTGAAGATCATTGCATGCAGCTAAGAGGCAATGGGTTGCTCAGTTCCATTGAACCTGCAGATGGTGGCTGCTGA 429 0.4406 MTMTPGDTPSFCKRPYSNICIPVAVLAAVPGKGGGLLEKPVIEKVTPGRESEFDLKKSRKTAPPYRVILHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSVVIICAQSDAEDHCMQLRGNGLLSSIEPADGGC 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00007 142 SUPERFAMILY ClpS-like 59 136 IPR014719 -
Vimu7g00007 142 Pfam ATP-dependent Clp protease adaptor protein ClpS 61 128 IPR003769 GO:0030163
Vimu7g00007 142 Gene3D - 59 137 IPR014719 -
Vimu7g00007 142 FunFam ATP-dependent Clp protease adapter protein CLPS1, chloroplastic 59 137 - -
Vimu7g00007 142 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 27 142 IPR022935 GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00007 Vimu-Chr7 69939 72280 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00007 7 69939 72280 Vimu7g00007 7 69939 72280 ECH