Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00002 TTGTTTTGGTCGGTCCCTAGTTTGATGAAAAATATGCAAGGCTTCAAGACAGCACAAGCTAGTTCACAACTCTATTGCCACTCTTCCTTTTTGCTTCGGGGAAACGACGGCAACAGAAACCCCACCACCGGGTTCTGTGATTTTGGGGACCTTCATCATTCCTCTGCCGTTTTTCATCAAGAAGCTGGTGTTGATTTAGGCTCAAGTTCTATGTTTAGTGTGAAGTCAAGCAATGTTGTTGGTGGCAGTAACATGCAATATGGAACATTGAGCACGAATGTTGGGTCTTCGGAGATTGGTTCAAGTGGGGGAGGGTGCATGGATACAGGGCTGCAACTGATGTACCACAAAGGAGTGTCTATGCAAACTTTGCCTTTGGGGAATGGTCATGTTGACAATTGGGCTGATTCAGGCATAGTGGATAATAGTCAACAAACTGATGATACTTCCACAGATATTGATACTGATGATAGAATCCAATGCAATAGAGTTAAGAACGGCTCACGTATGCTTATGCAGTCCAAGGATCAGACAAAGGTCAAACCTGAAGATCAGAAGACCCTTCGTAGACTAGCTCAGAATCGAGAGGCTGCAAAGAAAAGTCGGTTAAGGAAAAAGGCATATGTACAACAATTGGAGAACAGCCGAGTCAAGCTTGTGCAATTAGAGCAAGAACTTCAACGAGCACGTCAACAGGGTATATTTATTGCGACTGAAGGGAATCAAGGTCATTCGGCTGTTGGAAATGGTGCCTTAGCATTTGACATGGAGTATGCTCACTGGGTTGATGAACACCAACATTTGCTCAATGATCTAAGATTGGCTGTAAATTCTCATATGAGTGATGATGAGTTACACATCCTTGTTGAAGGTGTCAGGGTACATTATAATGAGTTATTTAGGTTGAAGAGAATAGGAGCAAAGGCTGATATATTTCACATACTTCATGGAACGTGGAAAACTCCAGTGGAAAGACGTTTTATGTGGCTTGGTGGATTCCGTTCATCTGAACTGCTAAAGATCATCAAGAACCACCTTGAGCCATTGACAGAGCAGCAGTTGTTGGACATTTGTAATTTGGAAAAATCTTCTGACAAGTCTGAAGATGCTTTAGATAAAGGTATGGAAGCATTGCAACAATATCTTGTGGAAACACTTTCCTCCAACTCCCTTGGACCCACTGGTAATGGAAATGTTGCTAATTACATGGACCAAATGGCTCTTGCAATGGCCAAGCTTGGTGAACTAGAAGGTCTCCTTCAGCAGGCTGATCTCTTGAAGCAACATTATCTTCAACAGTTGCAACGAATTTTGACAGTACGCCAAACCGCCAGGGCACTCCTTGTCCAAAATGATTTCATCTCAAGACTAAGAGCACTTAGTTCATTATGGTTGGCACGCCCTAGAGAATAA 1413 0.4282 MFWSVPSLMKNMQGFKTAQASSQLYCHSSFLLRGNDGNRNPTTGFCDFGDLHHSSAVFHQEAGVDLGSSSMFSVKSSNVVGGSNMQYGTLSTNVGSSEIGSSGGGCMDTGLQLMYHKGVSMQTLPLGNGHVDNWADSGIVDNSQQTDDTSTDIDTDDRIQCNRVKNGSRMLMQSKDQTKVKPEDQKTLRRLAQNREAAKKSRLRKKAYVQQLENSRVKLVQLEQELQRARQQGIFIATEGNQGHSAVGNGALAFDMEYAHWVDEHQHLLNDLRLAVNSHMSDDELHILVEGVRVHYNELFRLKRIGAKADIFHILHGTWKTPVERRFMWLGGFRSSELLKIIKNHLEPLTEQQLLDICNLEKSSDKSEDALDKGMEALQQYLVETLSSNSLGPTGNGNVANYMDQMALAMAKLGELEGLLQQADLLKQHYLQQLQRILTVRQTARALLVQNDFISRLRALSSLWLARPRE 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00002 470 PANTHER TRANSCRIPTION FACTOR TGA9 131 470 - -
Vimu7g00002 470 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 189 204 IPR004827 GO:0003700|GO:0006355
Vimu7g00002 470 Coils Coil 205 232 - -
Vimu7g00002 470 CDD bZIP_HBP1b-like 186 238 - -
Vimu7g00002 470 SUPERFAMILY Leucine zipper domain 186 229 IPR046347 GO:0003700|GO:0006355
Vimu7g00002 470 SMART brlzneu 182 245 IPR004827 GO:0003700|GO:0006355
Vimu7g00002 470 Gene3D - 185 234 - -
Vimu7g00002 470 ProSiteProfiles DOG1 domain profile. 251 467 IPR025422 GO:0006351|GO:0043565
Vimu7g00002 470 Pfam bZIP transcription factor 185 225 IPR004827 GO:0003700|GO:0006355
Vimu7g00002 470 Pfam Seed dormancy control 269 343 IPR025422 GO:0006351|GO:0043565
Vimu7g00002 470 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 228 IPR004827 GO:0003700|GO:0006355
Vimu7g00002 470 FunFam BZIP family transcription factor 185 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00002 Vimu-Chr7 20470 24650 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g00002 15 470 bZIP Transcription Factor Family AT1G68640 51.592 1.14e-144 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vimu7g00002 DOG1 4e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00002 7 20470 24650 Vimu7g00002 7 20470 24650 ECH