Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g01011 ATGAGAGAGGAGAACGTGAAGCAGCCATTGTTGGGGAGGAAGAAGTACCACGATAACTGCCCCGGTTGCAAAGTGGATCGGGCCAAAGAGTTGAGTGAGGGACAAGGCGTACCCATTAAAAATCTTGTTATCATATGGATATTGGTGTTGTCCTGTGCACTGCCTATATCATCTCTCTTTCCATTCCTTTATTTCATGGTAAGGGATTTTAATATTGCGAAGACAGAAGCTGATATCAGTTCTTATGCTGGTTATATTGGCTCTTCATTCATGCTTGGCAGATGTTTGACATCTGTATTATGGGGAGTTGTTGCTGATCGCTATGGTAGAAAGCCTGTAATGTTTACAGGGGTTGTGGTGGTTGTCATTTTCAACACACTATTTGGCCTTAGTACTAGTTTTTGGATGGCTCTTACTACAAGATTTCTTCTTGGAAGTTTAAATGGTATGCTTGGACCAGTGAAGGCCTATGCCACTGAAATTTTTCGAGATGAACACCATGCTCTAGGACTATCAACAATCAGTGCAGCTTGGGGCACAGGTTTAATCATTGGCCCAGCATTGGGAGGCTATTTGGCTCAGCCAGTAGAGAAGTACCCACATTTATTTTCAAAGGGTTCCATTTGGGATAAGTTTCCATACCTCTTGCCCAACCTTGTAATATCAGCAGTAGCATTTTTAGTAATTATTTGCTGCTTCTGGATTCCGGAAACACTTCACACCCACAGTTTTAGTGATGAATCCGTAGAGGATGCTGAAACTTTGGAAAATGGAAACAGTGGAGCTGGCAAAGACATGACAACTCAGAAGAATGAAAACCTCCTCCTGAATTGGCCCTTGATGTCATCTATCATAGTTTACTGTGTTTTCTCATTATGGAGTGTCAGTCCTCGAAAGCTAGGGGGTTTGAACTTCTCAACAAATGATGTTGGCAATGTTCTTTCAATAACAGGTGTTGCAATGATTATTTACCAAATTTCTGTATATCCATTTGTGGTAAGAGCTTGTGGACCTGTTGGAATTGCCCGCATTACAGGGATGTTATCAATACCTCTTTTGCAAAGCTACCCTTTCATAGCATTGTTGTCAGGTGTTGCACTAACCATAGTCATAGTTACTGCTTCAATTCTAAAGAATATTCTGTCCACCACCATTATAACTGGTTTGTTCCTCCTACAAAACCGAGCAGTGGAGCAACACCAAAGAGGTGCAGCTAATGGCATTTCTATGACAGGCATGTCCCTATTCAAAGCTATTGGTCCTGCTACAGGTGGTGCAGTATTAACTTGGTCACAAAAGCGGATGGATGCTTCATTCCTCCCTGGCACCAATATGGTGTTCTTTGTCCTGAACATAATTGAAGCAATTGGAATAATAATGATGTTCAAACCATTTCTTGCTGAGAAGAAGAAAACACAGTCAGATCAGTTACAGTGA 1437 0.4154 MREENVKQPLLGRKKYHDNCPGCKVDRAKELSEGQGVPIKNLVIIWILVLSCALPISSLFPFLYFMVRDFNIAKTEADISSYAGYIGSSFMLGRCLTSVLWGVVADRYGRKPVMFTGVVVVVIFNTLFGLSTSFWMALTTRFLLGSLNGMLGPVKAYATEIFRDEHHALGLSTISAAWGTGLIIGPALGGYLAQPVEKYPHLFSKGSIWDKFPYLLPNLVISAVAFLVIICCFWIPETLHTHSFSDESVEDAETLENGNSGAGKDMTTQKNENLLLNWPLMSSIIVYCVFSLWSVSPRKLGGLNFSTNDVGNVLSITGVAMIIYQISVYPFVVRACGPVGIARITGMLSIPLLQSYPFIALLSGVALTIVIVTASILKNILSTTIITGLFLLQNRAVEQHQRGAANGISMTGMSLFKAIGPATGGAVLTWSQKRMDASFLPGTNMVFFVLNIIEAIGIIMMFKPFLAEKKKTQSDQLQ 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g01011 478 Gene3D MFS general substrate transporter like domains 39 462 IPR036259 -
Vimu5g01011 478 FunFam Protein ZINC INDUCED FACILITATOR-LIKE 1 40 461 - -
Vimu5g01011 478 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 36 462 - -
Vimu5g01011 478 Pfam Major Facilitator Superfamily 45 376 IPR011701 GO:0022857|GO:0055085
Vimu5g01011 478 CDD MFS_SLC46_TetA_like 45 463 - -
Vimu5g01011 478 SUPERFAMILY MFS general substrate transporter 40 472 IPR036259 -
Vimu5g01011 478 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 469 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g01011 Vimu-Chr5 16176029 16182916 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g01011 5 16176029 16182916 Vimu5g01011 5 16176029 16182916 ECH