Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00984 ATGGAACCGTCGTCGGCGACGCCGGAGAATCGAAGCTACTGGCGGTGGAGCAAGCGGGACTTCTTCCCGGAGAAGTCATTCGAGAACGGGAAATCCTACTGCGCGGCGTTGGCTGACACGTGTCCCCGCCTCAAGGACCGTCTTCTTAACCGCTCGAGCGACTCGCACGAGCTGCTCGTGCTCCCCCTTGCCAGCGAGCACCGCATGAACCGCTGCCTTACCTGGTGGGACCTCAGCTGGTTGGCCTTCGGCTCGGTGGTCGGCTCCGGCATCTTCGTCGTTACCGGACAGGAGGCCCGGTTCCACGCCGGCCCCGCCATCGTCCTCTCCTACGCCGCCTCCGGCTTCTCCGCCCTCCTCTCCGCCCTCTGCTACACCGAGTTCGCCGTCGACGTTCCAGTCGCCGGTGGCTCCTTCTCCTTCCTCCGCATCGAGCTCGGCGACTTCCTCGCTTTCGTCGCCGCCGGCAACATCCTGCTGGAGGCTCTCGTGGGTGCCGCCGGGCTCGGCCGCTCCTGGTCTTCCTACTTCGCCTCCATGGTGAAATCCGACCCGGAATTCTTCCGGATCCGGATCCCCGGGTTCAAACCCGGGTTCGACCTGCTCGATCCGTTAGCCGTGGCGGTTCTTCTCATCACCAACGGCATTGCCGTTAGCGGTACCCGCAAAACCTCGATCTTAACCTGGATGAGTTCCCTGATCGCCACATTGGTGATCGCGTTCATAATTATAATCGGCTTCGTCCACGGAAAGGCGTCGAACTTGTCGCCGTTTGCCCCTTTCGGCGTGGACGGTGTTTTCAACGCCGCCGCCGTGGTGTACTGGTCTTACAGCGGTTTCGACATGGTGGCGACGATGGCTGAAGAGACGAAGAAGCCTTCGAGGGACATACCTATTGGTCTGGTTGGGTCAATGAGCTTGATTACGGTGATCTACTGCTTGATGGCTTTGTCCCTTGTGAGCATGGTAAACTACACTGAGATTGATGCTGACGCTGCTTACTCCGTGGCCTTTGTTCAGATTGGGATGAGTTGGGCTAAGTACCTTGTGAGCATTTGTGCGTTGAAGGGGATGACTACAAGCTTGCTTGTTGGGTCCATGGGTCAAGCTAGGTACACCACTCAGATTGCAAGGTCGCATATGATCCCACCTTTCTTCGCCCTCGTTCACCCCAAAACAGGAACCCCTGTGAATGCCACTCTCTTGACCACTCTTAGTAGCTCTGTCATCGCTCTTTTCTCTAGCTTGGATGTTCTCTCTAGTGTTTTCTCCATCAGTACGCTCTTCATTTTCATGCTTATGGCTGTTGCGCTGCTTGTGAGGAGGTACTATTCCAGGGAGAGCACTGGCAAGAGTGAGTTAGCCAGAGTTCTGATCTGCTTGTTTGTGATTGTTGGTTCTTCTGCTGTTGGGGCTGCGCTTTGGCATTCACGGATACTCGGTTGGATCGGTTATACGGTTTCGGCTTGTGTTTGGTTTTTGGGAACTTTGGGTATGAGTTTGCTTCCCAAGCAGAGAGCTCCCAAGGTCTGGGGGGTTCCCTTGGTTCCCTGGCTCCCCTCCTTGTCTGTTGCCACTAACCTCTTTCTCATGGGCTCTTTGGGCACTGAGGCTTTCTGGAGGTTCATCATTTGCACTGCTGTCATGTTCCTGTACTATTTTTTTGTCGCTGTCCATGCAACTTATGATGTCGAACATCAGAATGAAGGAAAGACTAATGATGAGGGAGTGCAAGATGCTACTGATCAAGAGGTGGTTGTTCTATAG 1767 0.5529 MEPSSATPENRSYWRWSKRDFFPEKSFENGKSYCAALADTCPRLKDRLLNRSSDSHELLVLPLASEHRMNRCLTWWDLSWLAFGSVVGSGIFVVTGQEARFHAGPAIVLSYAASGFSALLSALCYTEFAVDVPVAGGSFSFLRIELGDFLAFVAAGNILLEALVGAAGLGRSWSSYFASMVKSDPEFFRIRIPGFKPGFDLLDPLAVAVLLITNGIAVSGTRKTSILTWMSSLIATLVIAFIIIIGFVHGKASNLSPFAPFGVDGVFNAAAVVYWSYSGFDMVATMAEETKKPSRDIPIGLVGSMSLITVIYCLMALSLVSMVNYTEIDADAAYSVAFVQIGMSWAKYLVSICALKGMTTSLLVGSMGQARYTTQIARSHMIPPFFALVHPKTGTPVNATLLTTLSSSVIALFSSLDVLSSVFSISTLFIFMLMAVALLVRRYYSRESTGKSELARVLICLFVIVGSSAVGAALWHSRILGWIGYTVSACVWFLGTLGMSLLPKQRAPKVWGVPLVPWLPSLSVATNLFLMGSLGTEAFWRFIICTAVMFLYYFFVAVHATYDVEHQNEGKTNDEGVQDATDQEVVVL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00984 588 Pfam C-terminus of AA_permease 511 560 IPR029485 -
Vimu5g00984 588 PIRSF AA_transporter 64 578 - -
Vimu5g00984 588 Gene3D Amino acid/polyamine transporter I 67 501 - -
Vimu5g00984 588 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 52 561 - -
Vimu5g00984 588 Pfam Amino acid permease 73 475 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vimu5g00984 588 FunFam Cationic amino acid transporter 5 67 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00984 Vimu-Chr5 15149036 15152141 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00984 9 576 Organic Solute Cotransporters AT1G17120 69.542 0.0 802