Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00963 ATGGCCAGAGCAGCTTGCAACCATCTTCACTTGGTTCCCAGTTTAGTTCATCCATTGAAGTCAACCCTCTTCACAAATAACACTCTCTCCACCACACGCACTCGCTTCTATGACATTCAGCGAAGGTTCTCTTCATCCAAGATAAGCATGAGCCTCAGGGCTGGTATCGTTGGCCTTCCCAACGTTGGCAAATCCACTCTCTTCAATGCCGTTTTTGAGTATTTTGGCGGTTTAGGCATTGGTCATAGACACTTTGATGGGTATGTATTTTGGGGGAGGGGGAAGGACATGAAGATTATTATTCTTAGTAATGAACAAATTAAGCATCTGGTGGAAAATGGAAAGGCCCAAGCTGCTAATTTTCCATTTTGTACAATAGAGCCAAATGTAGGGATTGTTGCTGTTCCCGATTCTCGTCTCCCTGTACTCTCGGATCTCAGCAAATCTCAGCGTTCTGTTCCAGCATCAATAGAATTTGTGGATATTGCTGGGCTTGTCAAGGGTGCAAGTCAAGGCGAGGGGTTGGGTAACAAGTTTTTGTCGCATATTCGTGAGGTGGATTCTATACTTCAGGTTGTCCGATGTTTTGAAGACAACGACATTGTTCATGTGAATGGGAAGGTTGACCCCAAGTCTGATATCGATGTTATCAATTTGGAGCTCGTTTTCTCAGATTTGGACCAGATTGAAAAAAGAATTGATAAACTAAAGAAGGGCAAGGCAAAGGATTCACAATCTAAACTCAAGGAAGAGGCAGAAAAGTCTGCATTGGAAAAGGTTCAACAGGCGCTTATGGATGGAAAGCCTGCACGATCTGTGACCTTAACAGATTTTGAAAGGGATGCTGTAAAACATCTCTGCTTACTCACCATGAAACCTATTATATATGTGGCAAATGTTGCAGAAACCGATCTTGCAGATCCTGCAGACAATAATTTTGTCAAGGATGTTACAAATGTTGCATCTGAGTTGCAGTCCAGAATTGTAACAATTTCAGCACAGGTATTTTAG 1011 0.4253 MARAACNHLHLVPSLVHPLKSTLFTNNTLSTTRTRFYDIQRRFSSSKISMSLRAGIVGLPNVGKSTLFNAVFEYFGGLGIGHRHFDGYVFWGRGKDMKIIILSNEQIKHLVENGKAQAANFPFCTIEPNVGIVAVPDSRLPVLSDLSKSQRSVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFEDNDIVHVNGKVDPKSDIDVINLELVFSDLDQIEKRIDKLKKGKAKDSQSKLKEEAEKSALEKVQQALMDGKPARSVTLTDFERDAVKHLCLLTMKPIIYVANVAETDLADPADNNFVKDVTNVASELQSRIVTISAQVF 336
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00963 336 Gene3D - 37 268 IPR027417 -
Vimu5g00963 336 PANTHER OBG GTPASE FAMILY 46 334 - -
Vimu5g00963 336 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 52 336 IPR031167 GO:0005525
Vimu5g00963 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 334 IPR027417 -
Vimu5g00963 336 Pfam 50S ribosome-binding GTPase 54 205 IPR006073 GO:0005525
Vimu5g00963 336 CDD YchF 54 335 IPR041706 -
Vimu5g00963 336 PIRSF EngD 106 335 IPR004396 GO:0005524|GO:0005525|GO:0016887
Vimu5g00963 336 PIRSF EngD 49 75 IPR004396 GO:0005524|GO:0005525|GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu5g00963 Vimu-Chr5 14006871 14012666 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00963 5 14006871 14012666 Vimu5g00963 5 14006871 14012666 ECH