Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00951 ATGACAACACCGATGTTGAGGTTGTGGGGAGGCAATGGCGTCGACAATGTGGAGGCGATGACATTGACGTCCCTGGCGGAGGTTGACATTGGTGACGGTGCTGATATTGGTGACAGTGCGCATGAGGATGCAGATCTCGTGCTCATGCGGTGCACGCAGGTGGTATCGCGGTCGAAGATGTTAGAGCCGCTTCCTACGATATCATCAGATATAGAACCTGTTCCATTGTTGTCAGAAGTCGTCGTGGGGCGCTACTGGTGCGACGAGGGCCGGATCAGCGACGCTAAGGCTCTTTTTGCGAGGTCGCCTTTCACGCTCCGGCTTCTCACGAGCGAGTTCGTCATTGCCAACCACCATATGTTGAACCAATTCGGTGCATATTGTGACATTGCCGGGCGAGAACTGAAGATGGTCAGTTGTAAATCTCAATATTTTGTGCTTGCTTTGAGCTTCTGGGGGTGGATCACTTGTATCCACGTTACCTCCGAAAAGAACAGTTTGAAGCCTGGGGAAAAACTGAATTCCACCACCCTGGTTCTTTCTGAAAACGGTTATGGCCTTGGATTTCAAACACTTGACAACTGCTGTTACTTGATCATATCAGGTATAGGCCCCAAATATGAGTATTGGCCGGCTTGGGTTGGTAATAGAAATCAACCTGTTGACAAGGATGCAAGTCTGTTGCTAAGCCATTCTGGTGAACTGAAAATAGAATCCAAAGATATTGAACCCATCATCCTTTACTCATCACCACAACCTTCCGAAAACACTGTGGCCACCTTGTTGGACACGGGCAACTTTGTTCTGCAACAACTTCACCCCAATGGAACAAACACTACGCTGTGGCAAAGTTTTGATTATCCTACTGATAATTTGTTCCCTGGGATGAAGTTAGGTGTCAATCACAAGAGTGGTCATAAATGGTCAGTAGTTTCGTGGTTGACTTCTGAAAAACCAAGTGTTGGGGCATTTGAACTTGAATGGGAACCAACTGAAAAGGAATTGACCATCAAGCGAAGAGGAAAATTGTGTTGGACAAGTGGGAATCTGGGAAACGGTGGATTCATGCACGACACATATTACATGATTGTCTCAAACGAAAACGAAAGCTACTTCTCAATAACAACTTTCAATGAAGAGCATACAAGATGGGCGCTTTTAGAAACTGGGCAACTGATAAATCGGAATGGAGCCGATAATAATGTTGCGAGGGCTGATTTGTGTTATGGCTACAACACAGATGAAGGGTGCCAACAATGGGAGGATATACCCTTATGCAGGCATCCTGGTGATGTATTTGACAGAAGGGAAGGGTACCCCAATGAAGACATGGTAACCAATCTAGCAAATTCGAGTTATGGCCTAACTGATTGTCGGGATATGTGCTGGAGAGACTGCACTTGTGCTGGATTCAAAAACTATAATGATGATGATGGAACTGGTTGTGTATTCTATCACTGGAACTTCACCAAAGGTACAAATTTTGCTACTGGAGGCTCTACATTTTACTTACTTGTAAACAGCAACCATCACAAAGGTAAGAAAATGTGGATATGGATAATTGTTGTCTCAGTAGTAGCTGCTCTGTTAGTAATATGTGCAATTGCTCTTGTCATAAAGAAAAGAAAACGTCTGCTTCAAGAGAAAAAAAGAAAAGGGGTGACTGAGAATAACATGGCAGATTTAGCAGCACCAAATAGATTCTTTTATGCATGGGAGTTATGGAAAGAAGGTGCACCTCTCCAGTTAGTAGATCCATCACTGAGTGAGTCATTTGATGTTGATGAAGTGAAAAGATGCATTCAAGTGGGTCTCTTATGCGTAGCACACTATGCAAATGATCGACCAACAATGTCTGATGTTGTATCAATGTTAACAAATGAAAGTTCAATAGTTACCTTGCCTCAAAGACCCGCTTTCTATTTGGAAAGAGGTTGCTCTGATAAGAAAATATCCTCTGAAGAGTTAAATAGTAACTCTATGGATGAAATTACTGCTTCCTTTTGA 2007 0.435 MTTPMLRLWGGNGVDNVEAMTLTSLAEVDIGDGADIGDSAHEDADLVLMRCTQVVSRSKMLEPLPTISSDIEPVPLLSEVVVGRYWCDEGRISDAKALFARSPFTLRLLTSEFVIANHHMLNQFGAYCDIAGRELKMVSCKSQYFVLALSFWGWITCIHVTSEKNSLKPGEKLNSTTLVLSENGYGLGFQTLDNCCYLIISGIGPKYEYWPAWVGNRNQPVDKDASLLLSHSGELKIESKDIEPIILYSSPQPSENTVATLLDTGNFVLQQLHPNGTNTTLWQSFDYPTDNLFPGMKLGVNHKSGHKWSVVSWLTSEKPSVGAFELEWEPTEKELTIKRRGKLCWTSGNLGNGGFMHDTYYMIVSNENESYFSITTFNEEHTRWALLETGQLINRNGADNNVARADLCYGYNTDEGCQQWEDIPLCRHPGDVFDRREGYPNEDMVTNLANSSYGLTDCRDMCWRDCTCAGFKNYNDDDGTGCVFYHWNFTKGTNFATGGSTFYLLVNSNHHKGKKMWIWIIVVSVVAALLVICAIALVIKKRKRLLQEKKRKGVTENNMADLAAPNRFFYAWELWKEGAPLQLVDPSLSESFDVDEVKRCIQVGLLCVAHYANDRPTMSDVVSMLTNESSIVTLPQRPAFYLERGCSDKKISSEELNSNSMDEITASF 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00951 668 SMART blect_4 164 288 IPR001480 -
Vimu5g00951 668 Gene3D - 158 285 IPR036426 -
Vimu5g00951 668 ProSiteProfiles Bulb-type lectin domain profile. 164 282 IPR001480 -
Vimu5g00951 668 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 157 549 - -
Vimu5g00951 668 Pfam D-mannose binding lectin 212 313 IPR001480 -
Vimu5g00951 668 ProSiteProfiles PAN/Apple domain profile. 426 508 IPR003609 -
Vimu5g00951 668 SUPERFAMILY alpha-D-mannose-specific plant lectins 211 316 IPR036426 -
Vimu5g00951 668 Gene3D Transferase(Phosphotransferase) domain 1 544 640 - -
Vimu5g00951 668 Pfam PAN-like domain 440 489 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00951 Vimu-Chr5 13697158 13702147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00951 545 643 Receptor kinase-like Gene Family AT3G45860 44.444 2.98e-21 96.7