Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00932 ATGGATATGCCTTTGATCAATAGGGAGAATAAGCTGGAAGCATTTCAACTTCTTTACCAAATCACACCTTACATTGCCTTTGGTTTCATGGCTGCAAATGAAGCCATATTCCAAGCATCACAAGGAAAGAACTCAATACACATTGTTGATTTAGGAATGCAGCATACCCTTCAATGGTCTTCTCTGATCAGGGCCTTTGTTTCAAGTCCTGAAGGGCCTCCAATGGTTAGGATCACTGGCTTAACAGACAATGAAGATAACTCTAAACTTCAAACCAGCATGAATGTTCTTTTGCACAAGTATGTGAAAGAGAGTAGAGGCAATCTAAAGGAAATTCTGCTGTCAGTGAAGAAGTTAAGTCCAACTGCTTTTACAGTGGTGGAGCAAGATACAAACCATAATGGCCCTTTCTTCCTTGGGAGATTTTTGGAGTCCCTTCACTATTACTCAGCCATATTTGACTCTCTTGAGGCATGCATGCCAAGAAACAGCCAACAAAGGATGAAGATAGAGAGATTACACTTTGCAGAGGAAATTCTGAATATTGTAGCTTATGAGGGTCCAGAGAGAATAGAAAGACATGAAAGGGTAGACCAGTGGAGAAGGCAATTAGGCAGAGCAGGATTTCAGGTGATGCCATTGAAGTGCACAAGCCAAATTAGAATGATGCTTTCTGTTTATGACTGTGATGGCTACACATTATCAAGTGAGAAGGGAAACCTTCTTCTTGGATGGAAAGGAAGGCCAGTAATTATGTCCTCTGCCTGGCAAGTGGCAAGTGTTTGA 786 0.4148 MDMPLINRENKLEAFQLLYQITPYIAFGFMAANEAIFQASQGKNSIHIVDLGMQHTLQWSSLIRAFVSSPEGPPMVRITGLTDNEDNSKLQTSMNVLLHKYVKESRGNLKEILLSVKKLSPTAFTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEACMPRNSQQRMKIERLHFAEEILNIVAYEGPERIERHERVDQWRRQLGRAGFQVMPLKCTSQIRMMLSVYDCDGYTLSSEKGNLLLGWKGRPVIMSSAWQVASV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00932 261 Pfam GRAS domain family 9 89 IPR005202 -
Vimu5g00932 261 Pfam GRAS domain family 98 257 IPR005202 -
Vimu5g00932 261 ProSiteProfiles GRAS family profile. 1 257 IPR005202 -
Vimu5g00932 261 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 93 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00932 Vimu-Chr5 13353623 13354543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00932 18 260 GRAS Transcription Factor Family AT1G14920 35.374 9.50e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vimu5g00932 GRAS 2.3e-51 CL0063