Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00914 ATGAGAGTGAATGGGCGGTTGGTTTTGGACATTGATTCTGTTGGCACGTTCACAATGTGCCGTGAAGCACTAAAATATCTCAAGAAAGGAGGAGAAGGAAGGGGCAACTCTTCCGGTGGGGGGTCAATAATAAACATCAGTGCCACCTTGCATTACACAGCTTCTTGGTACCAAATTCACGTGTCTGCTGCAAAGGCAGCTGTTGATGCTACTACAAGAAACTTGGCACTAGAATGGGGAACAGACTATGACATTAGAGTCAATGGAATTGCTCCAGGTCCAATAAGTGACACTCCTGGCATGAGTAAACTAGCTCCCGACGAAATAAGTAGCAAAGCCAGAGACTATATGCCACTTTATAAACTTGGGGAGAAATGGGATATAGCCATGACTGCACTTTTCCTAGCGTCAGATGCAGGAAAATTCATCAATGGCGACATTGTGATAGTTGACGGAGGACTTTGGCTGAGCCGGCCTCGTCATTTAGCAAAAGAGGCTGTGAAGCAAGTATCTCGATCTGTAGAAAAGAGATCAAGAAATGCACCAGTTGGTGTTCCAAAAAGCAAGCTCTGA 573 0.452 MRVNGRLVLDIDSVGTFTMCREALKYLKKGGEGRGNSSGGGSIINISATLHYTASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPISDTPGMSKLAPDEISSKARDYMPLYKLGEKWDIAMTALFLASDAGKFINGDIVIVDGGLWLSRPRHLAKEAVKQVSRSVEKRSRNAPVGVPKSKL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00914 190 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE 7 178 IPR045017 GO:0008670|GO:0009062
Vimu5g00914 190 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 156 IPR036291 -
Vimu5g00914 190 MobiDBLite consensus disorder prediction 171 190 - -
Vimu5g00914 190 Pfam Enoyl-(Acyl carrier protein) reductase 7 154 - -
Vimu5g00914 190 Gene3D - 5 168 - -
Vimu5g00914 190 PRINTS Glucose/ribitol dehydrogenase family signature 61 80 IPR002347 -
Vimu5g00914 190 PRINTS Glucose/ribitol dehydrogenase family signature 5 16 IPR002347 -
Vimu5g00914 190 PRINTS Glucose/ribitol dehydrogenase family signature 118 138 IPR002347 -
Vimu5g00914 190 PRINTS Glucose/ribitol dehydrogenase family signature 83 100 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00914 Vimu-Chr5 12725133 12728880 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00914 6 190 Acyl Lipid Metabolism Gene Families AT3G12800 79.459 4.67e-99 286