Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00902 TTGGAAATGGCAGAGGAGTTGATTCTGTTGGATGATTGGCTGAGTATGTACGGCATGAGAGCAAGGATAGCACTTGCAGAGAAGGAGATAAAGTATGAATACAGAGAAGAGGATCTGGGAAACAAGACCCAACTGCTTCTGCAAATGAATCCAATTCACAAGAAGATTCCAGTTCTCATCCACAATGGTAAACCCATATGTGAGTCCATCATTATTGTTGAGTATATTGATGAGGTTTGGAAGGAGAAAGACTCTTTCTTACCATCAGATCCTTATGAGAGAGCTCAGGCCAGGTTCTGGGCAGATTTTGTGAACAAAAAGATAGGTGATGTTGGGTGGAGGATATGGGGAGGAAAGAGAGAAGGGATTGAAGAGGCAAAGAAAGAGTTTGTGGAGGGCTTAAAGGAATTGGAGAAGGAGCTTGGAGAGAAGGCTTACTTTGGGGGAGACACATTTGGATTTGTTGACATTGCTCTCATCCCTTTCTCAACCTGGTTTTACACTTATGAGGCATTGGGGAATTTCAAAGTGAAGGCAGAGTCTCCTAAGATCATTGCTTGGGTTGAGAGATGCAATCAGAGGGAAAGTGTTTCCAAATCTCTTGCTCGTGAAAAGGACGTCTATGACTTTGTTCTAAGCTACAGACACAGCCATCACTTGGACTAA 666 0.4309 MEMAEELILLDDWLSMYGMRARIALAEKEIKYEYREEDLGNKTQLLLQMNPIHKKIPVLIHNGKPICESIIIVEYIDEVWKEKDSFLPSDPYERAQARFWADFVNKKIGDVGWRIWGGKREGIEEAKKEFVEGLKELEKELGEKAYFGGDTFGFVDIALIPFSTWFYTYEALGNFKVKAESPKIIAWVERCNQRESVSKSLAREKDVYDFVLSYRHSHHLD 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00902 221 FunFam Glutathione S-transferase U20 90 221 - -
Vimu5g00902 221 Gene3D - 90 221 - -
Vimu5g00902 221 Coils Coil 120 140 - -
Vimu5g00902 221 CDD GST_C_Tau 91 214 IPR045074 GO:0004364|GO:0006749
Vimu5g00902 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Vimu5g00902 221 FunFam Tau class glutathione S-transferase 1 89 - -
Vimu5g00902 221 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Vimu5g00902 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 202 IPR045073 -
Vimu5g00902 221 Gene3D Glutaredoxin 3 89 - -
Vimu5g00902 221 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Vimu5g00902 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 210 IPR010987 -
Vimu5g00902 221 SUPERFAMILY GST C-terminal domain-like 78 215 IPR036282 -
Vimu5g00902 221 Pfam Glutathione S-transferase, C-terminal domain 122 190 - -
Vimu5g00902 221 SFLD Glutathione Transferase (cytosolic) 3 217 IPR040079 -
Vimu5g00902 221 SFLD Main.3: Omega- and Tau-like 3 217 IPR045073 -
Vimu5g00902 221 CDD GST_N_Tau 7 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00902 Vimu-Chr5 12336417 12337160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00902 3 218 Glutathione S-transferase Gene Family AT1G78370 60.648 5.39e-100 287