Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00895 ATGAATGAATCTGATTTAAAAGAAATGCATTCATCTACATGCCCTGAAAGAACTAAGATTGTGGAAAATGCAATTGTATACACAATTTCACTTAAGGGCCAGAAGACAGGATTTTATGCAGATCAGCGTGAGAATCGGAAGTTTATATCAACAATTTCAGATGGTCTAAAGGTTCTTGATCTTTGCTGCTATAGTGGTGGTTTTGCTCTAAATGCCGTGCGTGGAGGTGCTTTAAATGTCACTGGTATTGACACATCACTGCTAGCTTTGGAGCTTGCTAAAGAAAATGTTCTACTCAACAGCATTGATCCTGGAAGAATATCCTTTTTGAAGGAAGATGCAACTGAATTTATGAAGGGTGCTCTCTTGAGAAATGAATCTTGGGATATTGTCATCATCGATCCTCCTAAACTAGCACCAACAAAAAAGGAGAATCTTCTGAGAGGCAGTTACGCATATGGCTCAGTTTGGAACTGGGAAGACAGCCACTTTCTGCTCCGGTATTCTGGAGACTATAGCTTGACGCAATGCCAGGCCTTGGTTTTAGCACCAACTCCTGAGCTTGCTCAGCAGATTGAAAGGTTATGTGGGCACTTGGAGATTATCTTGGTGTTAAGGTTCATGCTTGTGTGGGAGGTACCAGTGTCCGTGAAGACCAACGCATTTTATCTAGCGGTGCTCATGTCGTGGTTGGTACCCCTGGTCGTGTTTGGTATGCTTCGTAGGCAATCAGTCCAATCCAGATCACATCAAGATGTTTATATGATGAGATGCTTTTCCGAGGTTCTACACAGTGCATCTGGGATGTACAGGAATTTGAATTCTCTTGCCATGCAACTCACAAAAAGAGGGGGTCTTCTGATGACCTGTTCCTGTTCTGGAGCTGTGACCCAAAGTGGGATATTTCTACGTATTCTTCAGGGTGCAGCATCTATGGCAGGTAGGAAAATCACTGTTCTCAGACAGTCTGGAGCAGCATGTGATCATCCTATTGATCCATCATATCCTGAAGGCGCATACCTCACCAACATTCTTTTGAGAGTTTCATGA 1050 0.4305 MNESDLKEMHSSTCPERTKIVENAIVYTISLKGQKTGFYADQRENRKFISTISDGLKVLDLCCYSGGFALNAVRGGALNVTGIDTSLLALELAKENVLLNSIDPGRISFLKEDATEFMKGALLRNESWDIVIIDPPKLAPTKKENLLRGSYAYGSVWNWEDSHFLLRYSGDYSLTQCQALVLAPTPELAQQIERLCGHLEIILVLRFMLVWEVPVSVKTNAFYLAVLMSWLVPLVVFGMLRRQSVQSRSHQDVYMMRCFSEVLHSASGMYRNLNSLAMQLTKRGGLLMTCSCSGAVTQSGIFLRILQGAASMAGRKITVLRQSGAACDHPIDPSYPEGAYLTNILLRVS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00895 349 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 153 IPR029063 -
Vimu5g00895 349 CDD AdoMet_MTases 57 136 - -
Vimu5g00895 349 PANTHER RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE 3 151 - -
Vimu5g00895 349 Gene3D Vaccinia Virus protein VP39 246 349 IPR029063 -
Vimu5g00895 349 Gene3D Vaccinia Virus protein VP39 18 198 IPR029063 -
Vimu5g00895 349 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 267 344 IPR029063 -
Vimu5g00895 349 Pfam S-adenosylmethionine-dependent methyltransferase 9 138 IPR019614 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00895 Vimu-Chr5 12158111 12178323 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00895 5 12158111 12178323 Vimu5g00895 5 12158111 12178323 ECH