Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00894 ATGTCTACGTCCGCCGCTGGAGGTGCTGGATCCAATGATTCCAATGCTGGCAGGAGACAAAGCAAGAGGCCTAAGTACTCAAAGTTTACACAACAAGAACTACCAGCGTGCAAGCCTATTCTCACACCACGAGCAGTTATTTCAGCCTTCTTGATTGTCACCCTAGTGTTCATTCCCATTGGAGTTGCTTCGCTAATTGCTTCGCATGATGTTGTTGAGATTATTGATAGGTATGACTCTCAGTGCATACCACCAAATGTGACAGACAAGGTGGCATACATTCAGACTCCTGGTGAAAAGCCATGCAATAGGACGCTACATGTGGACAAGCGTATGAAGTCTCCTATCTATGTTTACTACCAGCTTGACAACTTTTACCAGAATCATAGGCGGTATGTTAAAAGCCGAAATGATGACCAGCTGAGGGATTCCAAAAATGCTAACTCAACAAGTGGTTGTGACCCTGAAGATTCAGCAAATGGAATGCCAATCGTACCCTGTGGTCTTATAGCTTGGAGCTTGTTCAACGATACATACAGCTTCTCACGCAGCAGCATTAATTTGACAGTGAACAAGAACGACATCTCATGGAAAAGTGATAGGGATCACAAATTTGGAAGTGATGTTTTTCCTAAAAATTTCCAGAATGGTTCTTTAATAGGGGGTGGTAGTCTTGATGAAAACACACCTTTGAGTAAGCAAGAGGATCTCATTGTTTGGATGCGAACGGCCGCTTTGCCAACTTTTAGGAAGTTGTATGGAAGGATTGAAGTGGATTTGGAGAAAGGTGATGTCATTCAGGTGAATTTGAACAATGTCTACAACACATACAGTTTTAATGGCAAGAAGAAGCTTGTTCTGTCAACTACTACCTGGCTCGGCGGGAAAAATGACTTCCTTGGCATTGCTTATCTTACTGTTGGAGGATTGAGCTTCTTTTTGGCTATGGTCTTTACTCTTGTATATCTGGTCAAGCCTAGGTAA 984 0.4278 MSTSAAGGAGSNDSNAGRRQSKRPKYSKFTQQELPACKPILTPRAVISAFLIVTLVFIPIGVASLIASHDVVEIIDRYDSQCIPPNVTDKVAYIQTPGEKPCNRTLHVDKRMKSPIYVYYQLDNFYQNHRRYVKSRNDDQLRDSKNANSTSGCDPEDSANGMPIVPCGLIAWSLFNDTYSFSRSSINLTVNKNDISWKSDRDHKFGSDVFPKNFQNGSLIGGGSLDENTPLSKQEDLIVWMRTAALPTFRKLYGRIEVDLEKGDVIQVNLNNVYNTYSFNGKKKLVLSTTTWLGGKNDFLGIAYLTVGGLSFFLAMVFTLVYLVKPR 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00894 327 PANTHER CELL CYCLE CONTROL PROTEIN 50 18 327 IPR005045 GO:0016020
Vimu5g00894 327 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 65 327 IPR005045 GO:0016020
Vimu5g00894 327 MobiDBLite consensus disorder prediction 1 17 - -
Vimu5g00894 327 PIRSF Lem3/Cdc50 1 327 IPR005045 GO:0016020
Vimu5g00894 327 MobiDBLite consensus disorder prediction 1 30 - -
Vimu5g00894 327 MobiDBLite consensus disorder prediction 136 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00894 Vimu-Chr5 12151361 12154847 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00894 5 12151361 12154847 Vimu5g00894 5 12151361 12154847 ECH
Vimu4g01593 4 17123211 17124193 Vimu5g00894 5 12151361 12154847 PCT