Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00839 ATGTCATACCTGGCACAGTTGTTGTTGGTAGCAATAGTGATAGTCGGCACTTCCATGGGAGATTCTTCGTCAAATGACAAAGATGAATGCGCACAGCAATTGGCGGGACTAGCAACATGTTTGCCCTATGTTGGAGGTGAAGCACCAGCTCCAGCTACAGATTGTTGCAGTGGTCTGAAGCAAGTGCTCAAGAACAAGAAGAAGTGTTTGTGTGTAATCATCAAAGATCGCAATGATCCTGACCTTGGTGGTCTGCAGATTAATGTCACTTTGGCTTTGAATCTTCCCACTGCTTGCAATTCCCCTGTCAATGTCTCCAAGTGTCCTGAACTCTTGCACATGAATCCCAAATCACAAGAGGCTCAAGTTTTTTATCAGTTGGAGAAAGGAAAAAATGGCACAAGTCCCGCACCAAGTCCTTCAGCTGCAGTTGGAGCAAATCCTTCAAGCAACCAAACATCCAGTGCCCCACAGAACAATGATGCATTCTGCAAAGAAAATGGACTTTTTAGGTTAAATGTTTTGGCTATTGGGCTTCAAATTTGGGCTATAACTGGGCTTTTGTTCTAA 570 0.4404 MSYLAQLLLVAIVIVGTSMGDSSSNDKDECAQQLAGLATCLPYVGGEAPAPATDCCSGLKQVLKNKKKCLCVIIKDRNDPDLGGLQINVTLALNLPTACNSPVNVSKCPELLHMNPKSQEAQVFYQLEKGKNGTSPAPSPSAAVGANPSSNQTSSAPQNNDAFCKENGLFRLNVLAIGLQIWAITGLLF 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00839 189 SMART aai_6 30 108 IPR016140 -
Vimu5g00839 189 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 148 IPR043325 -
Vimu5g00839 189 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 109 IPR036312 -
Vimu5g00839 189 Gene3D - 27 108 IPR036312 -
Vimu5g00839 189 Pfam Probable lipid transfer 12 108 IPR016140 -
Vimu5g00839 189 CDD AAI_LTSS 37 100 - -
Vimu5g00839 189 MobiDBLite consensus disorder prediction 130 158 - -
Vimu5g00839 189 PRINTS Plant phospholipid transfer protein signature 50 64 IPR000528 GO:0006869|GO:0008289
Vimu5g00839 189 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
Vimu5g00839 189 PRINTS Plant phospholipid transfer protein signature 29 45 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00839 Vimu-Chr5 10862747 10864417 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00839 21 188 Acyl Lipid Metabolism Gene Families AT2G44300 50.000 5.42e-54 169