Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00815 TTGCCGCTGCAACTCTCTACCTTCCCTTCAGCCCCCATTCGCAATGGTGAGTCTCTGCTTCTCTTTATTCTTCTTCTATCTTCATTTCTGCCACGCGCTTCGTCTTTCTCACGCGTTATTCTCAATTCAACCCTTTGTGTTTTACCTTCTGTTTTCATTAGGCTTCGGAGAAGAAACTATCCAACCCCATGCGGGAAATCAAGGTGCAGAAGCTCGTCCTCAACATCTCCGTCGGCGAGAGTGGCGATCGTCTCACCAGAGCCGCAAAGGTGTTGGAGCAGCTTAGTGGCCAAACCCCAGTGTTTTCCAAAGTTGTCTAAAAAGTTTGGAATACTCAGATTTTACAACGAGACGGACGTTGTTGGTCTTGGGAATTTAGTTTATTCATGCTCACTTTTGCCAATGGCTAGATACACTGTCCGTTCTTTTGGTATCAGAAGAAATGAAAAGATTGCATGCTATGTCACTGTTAGAGGTGACAAGGCAATGCAACTTCTGGAGAGTGGATTAAAGGTCAAGGAATATGAACTTCTGCGAAAAAACTTCAGTGATACTGGGTGCTTTGGCTTTGGTATTCAGGAGCATATTGACTTGGGAATCAAGTATGATCCCTCAACTGGTATTTATGGAATGGACTTCTTTGTCGTTCTGGAGCGCCCTGGTTATCGCGTTGGCCGCCGCCGCCGCTGCAAGTCTCGTGTTGGGATCCAGCATCGTGTTACCAAGGAGGATGCTATGAAGTGGTTCCAGGTGAAATACGAGGGTGTTATCCTCAACAAATCACAGGCAATTGTTTAA 798 0.4599 MPLQLSTFPSAPIRNGESLLLFILLLSSFLPRASSFSRVILNSTLCVLPSVFIRLRRRNYPTPCGKSRCRSSSSTSPSARVAIVSPEPQRCWSSLVAKPQCFPKLSKKFGILRFYNETDVVGLGNLVYSCSLLPMARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIV 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00815 265 Gene3D - 124 261 IPR022803 -
Vimu5g00815 265 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 136 260 IPR002132 GO:0003735|GO:0005840|GO:0006412
Vimu5g00815 265 SUPERFAMILY RL5-like 134 257 IPR022803 -
Vimu5g00815 265 FunFam 60S ribosomal protein L11 121 258 - -
Vimu5g00815 265 Pfam ribosomal L5P family C-terminus 150 248 IPR031309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00815 Vimu-Chr5 10466730 10469381 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00815 136 265 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 93.846 3.89e-90 263