Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu5g00803 | ATGTCTCTTGATGGTAGAATCAGCATTGAAATTGGGGTTCATGCAACTGCTGCAAAGTGGTACAACATCTTTGCAAAGCAACTCCATCAAATTCAAAACCTTACTGATAGAATTCACCAAGCCAAGCTGCATCATGGTGAAGACTGGCACCACAATGAGGCCATCAAAAACTGGACTTATATCATAGATGGTAAAGTTAACACGTGTCAGGAGAGTGTGGAGTACGATGAAGCAAAGAAAATAATAACCTTCAAGCTCTTCGGTGGAGACGTGGCTAAACAGTTCAAGTTCCTCAACCTTATATTTGAAACAAGTGATAAGGAGAATGGTGGAGCTAATATCAAATGGACTGTTGAATATGAGAGGCTTAGTCAAGAAGTTCATCCTCCATATGGCTACATCGAGTACCTCTACAAATGCACTGTGGATTTTGATGCTCACCTCAAGGCATAG | 453 | 0.4106 | MSLDGRISIEIGVHATAAKWYNIFAKQLHQIQNLTDRIHQAKLHHGEDWHHNEAIKNWTYIIDGKVNTCQESVEYDEAKKIITFKLFGGDVAKQFKFLNLIFETSDKENGGANIKWTVEYERLSQEVHPPYGYIEYLYKCTVDFDAHLKA | 150 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu5g00803 | 150 | Pfam | Pathogenesis-related protein Bet v 1 family | 3 | 149 | IPR000916 | GO:0006952 | |
| Vimu5g00803 | 150 | SMART | Bet_v_1_2 | 2 | 150 | IPR000916 | GO:0006952 | |
| Vimu5g00803 | 150 | Coils | Coil | 147 | 150 | - | - | |
| Vimu5g00803 | 150 | Gene3D | - | 1 | 149 | IPR023393 | - | |
| Vimu5g00803 | 150 | PANTHER | POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN | 1 | 149 | - | - | |
| Vimu5g00803 | 150 | SUPERFAMILY | Bet v1-like | 1 | 149 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu5g00803 | Vimu-Chr5 | 10286370 | 10286912 | Tandem |