Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00768 ATGAAAGAATCAAGGACAAAGAAACAGCCTGAAGGTGATTCTGAGATTTCAGCATGGGTTAGTAAAAGCCGCAAGTTAGAAAAGAAAAGAGCATTGCAGCTCTCAAAGATTTTTGAGGAGCAGGACAAAATTGCAGTAGAGGGAAGTGATGATGAGGATACAGCCCAACACACTGGTAAATTTCTCTGTTTCCGAATACATAGGGAAGTGATGTTGAGGATACAGCCCAGCAGCTTAGGGCATTTAAAAAACCTGGCGGGGCTGAAAGTTCTCCATGGCCTTGATAAAGTTATGGAAGGCGGTACAGTAGTTTTAACTATTAAAGATCAGCCCATACTTGCTGATGGTGATGTTAATGAAGAGGTTGACATGCTCGAAAACATTGAAATTGGAGAACAGAAACGACGAAACGAGGCTTATAAAGCTGCAAAAAAGAAAACTGGTGTATATGATGATAAGTTCAATGATGATCCCTCCTTGGAGAAGAAAATGTTGCCACAGTATGATGATCCAGCTGCAGAAGAGGGAGTAACTTTGGATGAAAAGGGACGGTTCTCAGGTGAAGCTGAGAAGAAACTTGAAGAGCTGCGAAGAAGGTTAACAGGTGTTTCCACAAATACCTTTGAAGATCTTACTTCATCTGGAAAGGTATCATCAGATTACTATACTCATGAAGAAATGCTAAAATTTAAGAAGCCCAAGAAGAAAAAGTCCTTACGGAAGAAAGATAAGCTAGATATTAATGCCCTTGAAGCTGAAGCTGTCTCTTCAGGATTGGGTGTTGGTGACCTTGGTTCTCGGAACAATGTGAGGAGGCAAGCTATCAAAGAAGAGCAAGAAAGATTGGAGTCTAAGATAAGAAGTAATGCTTACCAGTCTGCTTATGCTAAAGCAGAGGAAGCCTCCAAATTGCTGCGTCAGGAACAAACTCTCAATGTTAAAACAGAGGAAGATGAAACTCCAGCTTTTGTAGATGATGATGAGGATCTTCGTAAATCCTTAGAGAAAGCAAGAAGATTAGCTCTTAAAAAGCATGAGGAAGATGGGGTATCTGGTCCTCAAGCTATTGCGTTGCTTGCTACCTCAAATCATAATAATGAGACTGATGGTCAAAACCCCACGGCTGGAGAGTCACGTGAAAACAAAGTGGTCTTTACAGAGATGGAAGAATTTGTCTGGGGTCTCCACATTGATGAAGAAGCACGTAAACCAGAAAGTGAAGATGTTTTCATGCATGATGATGAAGAGGCTATTGTTCCTGATGAAGAAAAGACTAATGAGGCTGGTGGATGGACTGAAGTTCAAGAAACTAATGAAGATGAACAACCCAATAAGGAAGACAAAGAGGAAATCGTTCCTGATGAAACTATCCATGAAGTTGCTGTAGGGAAAGGATTGTCAGGTGCTTTGAAACTGCTTAAAGATCGAGGAACACTTAAGGAAAGCATTGAATGGGGTGGCAGAAATATGGACAAGAAGAAAAGTAAATTGGTTGGAATTGTAGATGATGACGAGAAGGAAGCTCAGAAAAAAAGGGAGATTCGCATCGAAAGGACTGATGAATTTGGGAGAATTTTTGTTAGGAGTTGGATAGTTTATGAAAGAAGGAAGAAAAAGAAGGCCCAAGGCCCAACTGTCTTAGCGGTGAGGCGAGTGCGTATACAGATAGGATTTTCTTCTCGGATTCCTAACAGAGTGGTCCGACCTGTCAGATTCGGGGGGAGAGAGATCAGAGTAATGGAGGGAAAAAACGAAGGACACCTGAACGTGGATCTTCAGGAAATCATGTGGATGCTGGGAAATTGCAACCGTGATCACGAAGATGTATCGGATGGGAGTCAGACTTCGGTGAACGACATCCAAAGGACGAGGCGAGAGGATGAGAATGTAGGGTCGCGTGATGTGGAACGAACTGAGGGACAATTTAATTGGAGGAAGAAGGTGGAGATTCTCGTATTTGAGGGAGTGGATCCTTTGAACTGGATCAACCAAGCGGAGTGTTTCTTTGAGCTACAGGGGGTGACAGAGGAAGAGAAGGTCAGAATCGCATATGTCAGCATGGAAGGGAGCGCTGGCTATTGGTATCGGTTTTGGCGGGAAAAAGCGATAAATCGCACCTGGGAAGGACTGAAATGCGCGATGATCGGAAGATTTGGGGAAAGGAACAAGGGTTTGATTTTTGAGAGGCTCATGACGAACCGTCAGATCGGAACAGTCGAGGAATATATTCGAGACTTCGAGATTCTGGTAGGACAAACGAGCGGAGTGATTGGAGCACAACTTCTAGGCTATTTCCTCAGAGGCTTGTAG 2310 0.4312 MKESRTKKQPEGDSEISAWVSKSRKLEKKRALQLSKIFEEQDKIAVEGSDDEDTAQHTGKFLCFRIHREVMLRIQPSSLGHLKNLAGLKVLHGLDKVMEGGTVVLTIKDQPILADGDVNEEVDMLENIEIGEQKRRNEAYKAAKKKTGVYDDKFNDDPSLEKKMLPQYDDPAAEEGVTLDEKGRFSGEAEKKLEELRRRLTGVSTNTFEDLTSSGKVSSDYYTHEEMLKFKKPKKKKSLRKKDKLDINALEAEAVSSGLGVGDLGSRNNVRRQAIKEEQERLESKIRSNAYQSAYAKAEEASKLLRQEQTLNVKTEEDETPAFVDDDEDLRKSLEKARRLALKKHEEDGVSGPQAIALLATSNHNNETDGQNPTAGESRENKVVFTEMEEFVWGLHIDEEARKPESEDVFMHDDEEAIVPDEEKTNEAGGWTEVQETNEDEQPNKEDKEEIVPDETIHEVAVGKGLSGALKLLKDRGTLKESIEWGGRNMDKKKSKLVGIVDDDEKEAQKKREIRIERTDEFGRIFVRSWIVYERRKKKKAQGPTVLAVRRVRIQIGFSSRIPNRVVRPVRFGGREIRVMEGKNEGHLNVDLQEIMWMLGNCNRDHEDVSDGSQTSVNDIQRTRREDENVGSRDVERTEGQFNWRKKVEILVFEGVDPLNWINQAECFFELQGVTEEEKVRIAYVSMEGSAGYWYRFWREKAINRTWEGLKCAMIGRFGERNKGLIFERLMTNRQIGTVEEYIRDFEILVGQTSGVIGAQLLGYFLRGL 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00768 769 MobiDBLite consensus disorder prediction 423 449 - -
Vimu5g00768 769 MobiDBLite consensus disorder prediction 606 632 - -
Vimu5g00768 769 Pfam SART-1 family 12 516 IPR005011 GO:0000398
Vimu5g00768 769 Coils Coil 186 206 - -
Vimu5g00768 769 PANTHER SQUAMOUS CELL CARCINOMA ANTIGEN RECOGNISED BY CYTOTOXIC T LYMPHOCYTES 1 525 IPR005011 GO:0000398
Vimu5g00768 769 Pfam Retrotransposon gag protein 682 769 IPR005162 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00768 Vimu-Chr5 9519650 9524156 Dispersed/Transposed