Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00766 ATGTCGGAGACAGACGCAACAGGCTCTTTGAATACACAGTTACCTCCCTTCCAATTTGTACTCAAACCTTCTTCCATGCTCTCTTACAATCTACTTCCTTCCGCCCACCTGCTTCTTGTGCAGTTAGCAGGGACAGCAAAGTCTAGGTTTTCTGCCAAAGATTACAGTGATCATATGGCTCTTGTTCGAGCATATGAAGGATGGAAAGATGCAGAAAGAGAAGGATCGTCTTATGAATACTGCTGGAGAAATTTTCTCTCTGCCCAAACTCTTCAGGCTATTCATTCACTTCGGAAGCAGTTTAGCTTCATCTTGAAAGATGCTGGCTTGGTAGATGCAGATGCAAGCATGATTAACAAATTGAGTCACAATCAGTCTCTTGTCCGTGCTGTCATTTGTTCTGGACTCTTTCCTGGCATAGCATCGGTGGTGCACAGGGAGACATCCATGTCATTTAAAACAATGGATGATGGCCAGGTTTTATTATATGCTACCATCCCATACCCATGGTTGGTTTTTGGTGAGAAAGTTAAGGTCAATGCTGTTTTCATCCGTGATTCCACTGGTGTATCTGATTCAATACTTATCCTTTTTGGTGGTGCTCTAAGTAATGGGATACAGGCTGGGCATCTAAAAATGTTAGATGGATATGTTGATTTCTTCATGGATCCTAATTTAGCTGACTGCTATTTGAAGCTTAAGGAAGAGCTCAATAAGCTTATCCAGAAGAAGCTTGAAGATCCTAGCATTGACATTCACAAGGAAGGGAAGTACTTGATGCTTGCTGTTCAGGAGCTGGTTTCAGGGGATCAATGTGAAGGAAGATTTGTGTTTGGCCGTGAAAGCCGGAAGCCGAGGGCCTCTAATGATGAAAATAAATTCACAAAAGATGGGACAAATCCCAAGAGCTTGCTGCAAACACTGTTGATGCGAGCAGGACACTCCCCACCAAAATACAAAACCAAACATCTCAAGACGAATGAGTTTAGGGCACTGGTGGAGTTCAAGGGAATGCAATTTGTTGGCAAACCGAAGAGAAACAAGCAGCTTGCAGAAAGGGATGCTGCTATAGAGGCATTGGCTTGGTTGACTCATACTTCTGACAATAATCAGCCTGAAGATGATAACTCTCCTCCCGACGTCACTGATAACATGCTAAAACTCCTAGGGAAGCGTAGAAAATCAAAGCGACGCCATGATTGA 1203 0.4331 MSETDATGSLNTQLPPFQFVLKPSSMLSYNLLPSAHLLLVQLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSSYEYCWRNFLSAQTLQAIHSLRKQFSFILKDAGLVDADASMINKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQVLLYATIPYPWLVFGEKVKVNAVFIRDSTGVSDSILILFGGALSNGIQAGHLKMLDGYVDFFMDPNLADCYLKLKEELNKLIQKKLEDPSIDIHKEGKYLMLAVQELVSGDQCEGRFVFGRESRKPRASNDENKFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNEFRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTHTSDNNQPEDDNSPPDVTDNMLKLLGKRRKSKRRHD 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00766 400 SMART DRBM_3 301 364 IPR014720 -
Vimu5g00766 400 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 128 201 IPR011709 -
Vimu5g00766 400 MobiDBLite consensus disorder prediction 280 300 - -
Vimu5g00766 400 PANTHER ATP-DEPENDENT RNA HELICASE 41 243 - -
Vimu5g00766 400 Gene3D - 279 368 - -
Vimu5g00766 400 MobiDBLite consensus disorder prediction 364 400 - -
Vimu5g00766 400 FunFam DEA(D/H)-box RNA helicase family protein 282 368 - -
Vimu5g00766 400 Pfam Double-stranded RNA binding motif 301 363 IPR014720 -
Vimu5g00766 400 SUPERFAMILY dsRNA-binding domain-like 294 377 - -
Vimu5g00766 400 MobiDBLite consensus disorder prediction 364 378 - -
Vimu5g00766 400 MobiDBLite consensus disorder prediction 280 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00766 Vimu-Chr5 9479755 9483027 Dispersed