Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00765 ATGGCTGCAACCACCACTCTCTCCTTCCACTATCCATATCGAACGCTCCCTTCGTATTCTCAGTTTTCTCTCTCTTCACCTTCTTCCCGCTTCAAACCCTACACTGTTGTTTCCCGCTACAATCTCTGCATCTCCACCACCGCCACCCTCTCTGTGTTGGCTTTCCGAAGCCCAAACTCTCCGACGTTTCTCGCAAAGGCTTCTCGGAACACTCAGCCCATGCTCCCTCCTTTCAACGTTTTGATTACTGGCTCAACCAAAGGAATAGGGTATGCATTGGCGAAAGAGTTTTTAAAAGCTGGTGACAACGTCCTGATTTGCTCAAGATCAGATGAAAGGGTAGAAGCTGCTGTCCGGAGCCTGAGAGTAGAATTTGGGGAGCAGTATGTGTGGGGAACTAAATGTGATGTGAGAAATGCAGAGGATGTGAAGAATTTAGTTTCATTTGCTCAAGAAAAATTGAAATATATTGATATATGGATCAACAATGCTGGATCAAATGCATATAGCTATAAGCCACTTGTTGAGGCTTCAGATGAAGATCTTATAGAGGTGGTTACAACAAATACACTTGGCTTGATGATATGTTGTCGAGAGGCAATCAAGATGATGGTGGACCAACCTCGAGGAGGTCATATTTTCAATATTGATGGAGCAGGTTCGGATGGGAGGCCAACTCCTAGGTACCTTTTTGGATTTACCGGAGCAGAATTGAAGATGCAAGATGTTAAAAATGTCCTAGTGCATAATCTTTCGCCAGGAATGGTTACAACGGATCTTCTCATGTCTGGTGTTAATACAAAGCAGGCAAAGTTTTTCATTAATGTCTTGGCAGAACCGGCTGAAGTGGTTGCAGAATACTTAGTTCCAAACATTAGATCCATCCCTGCAAACGGATCAAAGAAACCAACATACATTCGATTCCTCACCGGTTTGAAAGCCTATTCCCAGATATTTTCAAGATTGGCATTCGGAGCAAGAAGGAACCGATACATTCTTGAAGATTGA 1008 0.4355 MAATTTLSFHYPYRTLPSYSQFSLSSPSSRFKPYTVVSRYNLCISTTATLSVLAFRSPNSPTFLAKASRNTQPMLPPFNVLITGSTKGIGYALAKEFLKAGDNVLICSRSDERVEAAVRSLRVEFGEQYVWGTKCDVRNAEDVKNLVSFAQEKLKYIDIWINNAGSNAYSYKPLVEASDEDLIEVVTTNTLGLMICCREAIKMMVDQPRGGHIFNIDGAGSDGRPTPRYLFGFTGAELKMQDVKNVLVHNLSPGMVTTDLLMSGVNTKQAKFFINVLAEPAEVVAEYLVPNIRSIPANGSKKPTYIRFLTGLKAYSQIFSRLAFGARRNRYILED 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00765 335 Gene3D - 79 295 - -
Vimu5g00765 335 Pfam short chain dehydrogenase 80 262 IPR002347 -
Vimu5g00765 335 PRINTS Glucose/ribitol dehydrogenase family signature 244 261 IPR002347 -
Vimu5g00765 335 PRINTS Glucose/ribitol dehydrogenase family signature 155 166 IPR002347 -
Vimu5g00765 335 PRINTS Glucose/ribitol dehydrogenase family signature 205 221 IPR002347 -
Vimu5g00765 335 PRINTS Glucose/ribitol dehydrogenase family signature 79 96 IPR002347 -
Vimu5g00765 335 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED 66 332 - -
Vimu5g00765 335 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 79 286 IPR036291 -
Vimu5g00765 335 CDD SDR_c 80 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00765 Vimu-Chr5 9471914 9478943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00765 80 260 Acyl Lipid Metabolism Gene Families AT1G24360 28.947 1.78e-14 71.2