Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00596 ATGACACGGATAAAGGTATGTGATTTAGTAGTGTCTGGGTTTATGATTACTCTGCACCATAGCCCTTCTGACTTTGTCCCAGTAATGGAGCTATCTTCATTTTCTTTCTCAACAGCAATAGTGTGTCTGGTGAGCGTGATCGTTGGTGTGATTCCGTTATGGGCACTGAAGATAGTGAATACGCTGTGGTTTAGGCCTAAGAGGTTCGAGAAACTTCTGAGAGCACAAGGCCTTCGTGGTGACCCGTACTCCCTTTTCACCTCCAACCAAAACCAGGCTCCACAAAACAAGCATAATTCGCAATCTTTTGTTGTCTCCGACGATGTTGCTCCTCGATTGTCCTTGCCGACTTACAACACTGTTGCCAAATACGGTTCACTTTTCCTACCTCCTAAAATTTGTAGCATGAAAGTGATGTTTTCCGGCATCATTCCATGCAAGAATTCCTTTTTATGGGAAGGCACAACACCTGAGGTCATCATCACCGATCCAAATCAAATCAAAGAAGTCTTCAATAATATTCATGATTTCCATAAACAAAAGATAACTGGCCTTGCAAAGTTCTTGTTCAATGGTCTGATAAGCTACGAGGGTGATAAGTGGGCTCAACGTCGAAATATTATCAACCCTGCATTCAACTTAGAAAAATTGAAAAACATGCTGCCAGCATTTTCCCAAAGTTGCCATGATTTGATTAGCGAGTGGATGGGAATGTTGTCATCAGATGGAAAATGTGAGATTAACGTTTGGCCTTTCATTCAGAATTTGACTCGTGATGTAATTTCTAGAACAGCTTTCGGAAGCAGCTATGCAGAAGGAAAAAAGATATTTCAGCTTCTCAGAATTCAGGAAAAACTTGTCATCACTGCAAAGTACCACAAGGCACCAATATTTGGGTAA 900 0.4133 MTRIKVCDLVVSGFMITLHHSPSDFVPVMELSSFSFSTAIVCLVSVIVGVIPLWALKIVNTLWFRPKRFEKLLRAQGLRGDPYSLFTSNQNQAPQNKHNSQSFVVSDDVAPRLSLPTYNTVAKYGSLFLPPKICSMKVMFSGIIPCKNSFLWEGTTPEVIITDPNQIKEVFNNIHDFHKQKITGLAKFLFNGLISYEGDKWAQRRNIINPAFNLEKLKNMLPAFSQSCHDLISEWMGMLSSDGKCEINVWPFIQNLTRDVISRTAFGSSYAEGKKIFQLLRIQEKLVITAKYHKAPIFG 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00596 299 Gene3D Cytochrome P450 63 294 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00596 299 PANTHER CYTOCHROME P450 FAMILY MEMBER 54 289 - -
Vimu5g00596 299 Pfam Cytochrome P450 151 282 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00596 299 PRINTS Group II E-class P450 signature 198 218 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00596 299 PRINTS Group II E-class P450 signature 255 273 IPR002402 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00596 299 SUPERFAMILY Cytochrome P450 150 280 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00596 Vimu-Chr5 6528652 6531314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00596 44 299 Cytochrome P450 AT3G14690 40.154 1.44e-60 199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00596 5 6528652 6531314 Vimu5g00596 5 6528652 6531314 ECH
Vimu5g00596 5 6528652 6531314 Vimu4g01757 4 19169434 19172469 PCT