Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00576 ATGATGGGATCCTTTCACGTGGAGAAGAAATGGCAATTTCCTCTCATTATGATCTCATTTGTGTTCATATTCTTTCTAGCCACTTGTTTCAACATGGGGCTTGTTTCTACAATTCACAGCTTCAATTCAATACTATTCTTTCTCCCATCTCGCCTAGCCATAAACCAATCTGCTCCAGTTTTTGTGGAGACAAAGATTTCTTCTACAGCTCCAGCTCCTACTGTGGTTGCAATTCCTCGCTTTGCTTATTTGATTTCTGGCTCAAAAACTGACTTGGATAAGCTTTGGAGAACTCTTCTTGCCCTTTACCATCCCCTGAACCATTATATTGTTCATTTGGACCTTGAGTCACCTCTAGAGGTGAGGTTGGAGCTTGCTTCTAGAATTGAGAAACAGCCTATTTTCTCTGAGGTTGGGAATGTTTTCATGATTCAGAAAGCTAATATGGTCACTTACAGAGGACCAACCATGATTTCTCACACTCTTCATGCTTGTGCCATTCTGCTCAAGAGAACTAAAGACTGGGATTGGTTTATTAACCTTAGTGCTTCAGATTACCCTCTCGTCACTCAGGATGGTTCAGCATGGATGGTTTTATCACGCTCCTTTGTAGAATATGTTGTGTGGGGTTGGGATAATCTTCCAAGGACCCTTCTTATGTACTACACTAATTTCATCTCCTCCCCTGAAGGCTACTTTCAGACTGTGGTGTGCAATGAGCCAGAACTAGCCAAAACTGTTGTGAACAGTGACTTGCATTATATTTCATGGGACAATCCCCCCAAACAGCACCCTCATGTCCTTACAATCAATGACACAAACAAGATGATTGCAAGCAAAGCTGCCTTTGCAAGGAAATTCAAGCACAATGATCCAGTCTTAGATGAGATTGATAAACAATTACTACATAGGGAAAAGGAACAACTATTCACCCCAGGTGGTTGGTGTTCTGGCAATCCGACATGTTCAAAGGTTGGCAACATTTACAAGATTACACCTGGTCCTGGATATCTAAGGCTGCGGTTCCTTGTAACTAGGCTAACTTGGATGGCTAAATTTGGGTACAACAGTCATAGATATGAACATAGTCAAAGTTTACACCTGACACCATATTTATTATCAAAGGGCCATTCGGACGGTCTTGAAGGACAGGGAGCAACTAAGCGACCTAAAGACGAAAGATACCAGGACCTCGACAGATAA 1203 0.4198 MMGSFHVEKKWQFPLIMISFVFIFFLATCFNMGLVSTIHSFNSILFFLPSRLAINQSAPVFVETKISSTAPAPTVVAIPRFAYLISGSKTDLDKLWRTLLALYHPLNHYIVHLDLESPLEVRLELASRIEKQPIFSEVGNVFMIQKANMVTYRGPTMISHTLHACAILLKRTKDWDWFINLSASDYPLVTQDGSAWMVLSRSFVEYVVWGWDNLPRTLLMYYTNFISSPEGYFQTVVCNEPELAKTVVNSDLHYISWDNPPKQHPHVLTINDTNKMIASKAAFARKFKHNDPVLDEIDKQLLHREKEQLFTPGGWCSGNPTCSKVGNIYKITPGPGYLRLRFLVTRLTWMAKFGYNSHRYEHSQSLHLTPYLLSKGHSDGLEGQGATKRPKDERYQDLDR 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00576 400 PANTHER GLYCOSYLTRANSFERASE 193 353 IPR044610 GO:0015020
Vimu5g00576 400 MobiDBLite consensus disorder prediction 379 400 - -
Vimu5g00576 400 MobiDBLite consensus disorder prediction 382 400 - -
Vimu5g00576 400 Pfam Core-2/I-Branching enzyme 81 192 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00576 Vimu-Chr5 6229237 6232367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00576 79 348 Glycosyltransferase AT1G03520 43.953 1.48e-89 273