Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00571 ATGGGTCGCCCACCCAGTAATGGTGGCCCAGCCTTTCGCTTCAATCCGACTGAGGTAGGAGAAATGGAAGCTATTCTTCATGAACATGAGAATGCAATGCCAGCACGTGAAATTCTCACAGCTCTTGCAGAGAAGTTCAGTGAATCACTAGAACGTAAAGGCAAGATTACAGTGCAAATGAAACAAGTTTGGAATTGGTTTCAAAATAAGCGGTATGCAATAAGAGCAAAGTCAAGTAAGACTCCTGGAAAGTTAAATATTACACCTATGCCTCGGGATGATGCAACCCCGGTGAGGACTATGCCTCAACAACCAACAGCTGCTCCAATTCCTACTGCTTCTGTTACAGCAGTTTTGCCAGCAGTAAAAGCAACTCCAGAAAATCCTGTTATGGAATTCGAAGCTAAATCTGGAAGGGATGGAGCATGTTATGTTAAGTGGATGAACCCTGATGAAATTGTTAGAACACATTTCATGTTATCAGTGCTTATCGTTAGAGAACTTGCGCTTGCATTAGCATTAATAGTTTTTGATATTACTATTAGTGTTAGACAATATGAAGTGCTGGTACGATTTGCTGGTTTTGGGCCTGAGGAAGATGAGTGGATTAACATTCGAAAGCATGTCAGACCACGATCTTTGCCATGTGAATCATCAGAATGTGTTGTAGTAATCCCGGGTGATCTCATACTTTGTTTTCAGGAAGGTAAGGAGCAAGCCCTATACTTTGATGCCCATGTGCTTGATGCTCAAAGACGGAGGCATGATGTAAGAGGCTGCCGTTGTAGATTTTTGGTTCGCTATGATCATGATCAATCAGAGGAAATCGTGCCGCTTAGGAAGATTTGTCGCCGGCCGGAAACTGATTACCGATTACAGCAACTTCATGCTGTTGTGAATGAGGTAGCACCTGTGGATCAACAGAAGACTGGTATGGATCCATCAGTACCAAAGCAGCTGATTGCAGCAAGCATTCATATGGAGACTCCTGTTGTGCAAACAAATGTTCCTCAAACTCCTCAAGGTATGGATATGGATGTAGATCAAAAGAAAGCTGAAACAAACATTGATGTTCCATCAGTAAACTCTACCATCACCCCAGGCAATGCCCCATTCACTACTGTCATTACTACAAGCAGTGTTCCTCAAGTCACTACTCAGACTCAGGACATGGTTGAATGA 1182 0.4298 MGRPPSNGGPAFRFNPTEVGEMEAILHEHENAMPAREILTALAEKFSESLERKGKITVQMKQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDDATPVRTMPQQPTAAPIPTASVTAVLPAVKATPENPVMEFEAKSGRDGACYVKWMNPDEIVRTHFMLSVLIVRELALALALIVFDITISVRQYEVLVRFAGFGPEEDEWINIRKHVRPRSLPCESSECVVVIPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKICRRPETDYRLQQLHAVVNEVAPVDQQKTGMDPSVPKQLIAASIHMETPVVQTNVPQTPQGMDMDVDQKKAETNIDVPSVNSTITPGNAPFTTVITTSSVPQVTTQTQDMVE 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00571 393 Gene3D - 10 84 - -
Vimu5g00571 393 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Vimu5g00571 393 SUPERFAMILY Homeodomain-like 4 76 IPR009057 -
Vimu5g00571 393 Gene3D - 129 215 - -
Vimu5g00571 393 Pfam SAWADEE domain 177 283 IPR032001 GO:0003682
Vimu5g00571 393 SMART HOX_1 7 81 IPR001356 GO:0003677
Vimu5g00571 393 MobiDBLite consensus disorder prediction 82 109 - -
Vimu5g00571 393 Gene3D - 216 288 - -
Vimu5g00571 393 CDD homeodomain 13 75 IPR001356 GO:0003677
Vimu5g00571 393 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 358 IPR039276 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00571 5 6106042 6123164 Vimu5g00571 5 6106042 6123164 ECH