Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00563 ATGGCAAATTTCCCCTCACCTTGTTCTTCGTCTTCTTCTTCTTCTACGGCGTCGTTTGGATCTTCGACAAGTGCAAAGACGTGGGTTGTCCATGGAATTGTGGCGGGAGTGGCGATTGCAGCGGCGGTGGGTGCACGTGCTTACATGACCCGATTCGACAAGTTTCGGAGCCGGGTCTTGGGTATTATACCCGCCCGATATGCATCTTCTCGGTTTCCGGGAAAGCCTCTGGTTCAAATCCTGGGCAAGCCCATGATCCAGCCTTTGCTGTATCTGAATTTTTTCATGCGTGTAAAATCTCTTGTTGGTCTTTTGAAGATTTTTGTGCACTACTTGTGCACTTTGCCTGGTGCTTCATGTTCAAGAAAGTTTGTGGCAACTGATGATGAAAAGATTGCCGACTGCTGTCTACAATTTGGAGCTGATGTTATTATGACATCAGAAACTTGCAAAAATGGTACGGAGCGCTGCAATGAAGCCCTACAGAAGCTTGGGAAAAATTATGATATTGTTGTCAACATTCAGGGTGATGAACCACTTATTGAACCTGAGATAATAGATGGTGTTGTGAAAGCTTTGCAGGCAGCTCCAGATGCAGTGTTCAGCACTGCAGTCACATCTTTAAAGCCTGAAGATGCTCATGATCCAAATAGAGTGAAATGTGTGATAGATAATCGTGGTTATGCCATCTATTTTTCACGAGGATTAATCCCATTCAACAAGTCAGGGAAGGTCAATCAACAGTTCCCGTATTTGCTTCATCTTGGGATTCAGAGCTATGATGTGAAGTTTCTAAGGATATACCCTGATCTTCAACCTACTCCCTTGCAACTAGAAGAGGATTTGGAGCAGCTTAAAGTCCTTGAGAATGGCTACAAGATGAAGGTGATAAAGGTTAATCATGAGGCCCATGGTGTTGACACTCCGGAAGATGTTGGAAAGATAGAATCTCTAATGCGTGAGAGGAACTTGTCTTGA 978 0.4427 MANFPSPCSSSSSSSTASFGSSTSAKTWVVHGIVAGVAIAAAVGARAYMTRFDKFRSRVLGIIPARYASSRFPGKPLVQILGKPMIQPLLYLNFFMRVKSLVGLLKIFVHYLCTLPGASCSRKFVATDDEKIADCCLQFGADVIMTSETCKNGTERCNEALQKLGKNYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAHDPNRVKCVIDNRGYAIYFSRGLIPFNKSGKVNQQFPYLLHLGIQSYDVKFLRIYPDLQPTPLQLEEDLEQLKVLENGYKMKVIKVNHEAHGVDTPEDVGKIESLMRERNLS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00563 325 SUPERFAMILY Nucleotide-diphospho-sugar transferases 58 319 IPR029044 -
Vimu5g00563 325 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 106 323 IPR029044 -
Vimu5g00563 325 PANTHER 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE 124 324 - -
Vimu5g00563 325 NCBIfam 3-deoxy-manno-octulosonate cytidylyltransferase 118 312 IPR004528 GO:0008690
Vimu5g00563 325 CDD CMP-KDO-Synthetase 58 318 IPR004528 GO:0008690
Vimu5g00563 325 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 48 90 IPR029044 -
Vimu5g00563 325 Pfam Cytidylyltransferase 123 292 IPR003329 -
Vimu5g00563 325 Pfam Cytidylyltransferase 61 87 IPR003329 -
Vimu5g00563 325 FunFam 3-deoxy-manno-octulosonate cytidylyltransferase 106 320 - -
Vimu5g00563 325 Hamap 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 57 320 IPR004528 GO:0008690