Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00545 ATGATGGCGCTTCCGAGAGGATGTTTGGCAAAGATGTTGTCACACCGTAATCCAATGTTTTTGTCCCTCTATCCTCTTACTCTGCAGCCTGCCAACCTTGCACTTCATCGAACGCATTCTGTCACACCCTCTGCTTCGCTCTCCAATTCCCAGACCCCTTCTTTCCACGAGCTCCACTTTCACTGGAAACCCTTGTGCTTGTACCATTGCCAGGGAAAATGCGCCAAGATGGATGATCCTATCCACCTTGAGACGTTTAATCATGATTGCTCCAATGGGCTTAAAGTTGACATTGCTGAGTTGAACAAAATACGTCCTCAGAATCTAGACTATTTCCTTGTGCTTGATTTGGAGGGTAGGGTTGAGATTCTTGAGTTTCCAGTTCTAATGATTAGTGCAAAAACATTGCAAGTTGAAGACATATTCCACAGGTTTGTGAGACCCTCAAAAATGAGTGAACGGAGAATAAACGAATACATTGCAAACAAATATGGGAAATTTGGAGTTCACAAAGTTTGGCATGACACAGCAATCCCATTTACGGAAGTTATTCAGCAATTTGGAGTTTGGTTGATGCAAAATCAGTTGTGGATGGGTGCAGAACTTAATCGTGCAGCATTTGTAACATGTGGAAATTGGGATTTGAAAACTAAGGTCCTTCAGCAATGTGAAGTGTCAAAGATAAAGCTTCCTCCATATTTTATGGAGTGGGTTAATCTCAAAGATGTCTATTTGAACTTTTATAATAGGAGGGCCACAGGAATGGTTACAATGATGAAGGAACTCCAAATACCATTGATGGGAAGTCATCATCTTGGCATTGATGACAGTATGAACATAGCAAGAGTACTGCAACGCATGCTTCTTGATGGTGCACTCATTCAG 885 0.4192 MMALPRGCLAKMLSHRNPMFLSLYPLTLQPANLALHRTHSVTPSASLSNSQTPSFHELHFHWKPLCLYHCQGKCAKMDDPIHLETFNHDCSNGLKVDIAELNKIRPQNLDYFLVLDLEGRVEILEFPVLMISAKTLQVEDIFHRFVRPSKMSERRINEYIANKYGKFGVHKVWHDTAIPFTEVIQQFGVWLMQNQLWMGAELNRAAFVTCGNWDLKTKVLQQCEVSKIKLPPYFMEWVNLKDVYLNFYNRRATGMVTMMKELQIPLMGSHHLGIDDSMNIARVLQRMLLDGALIQ 295
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00545 295 Pfam Exonuclease 118 284 IPR013520 -
Vimu5g00545 295 CDD ERI-1_3'hExo_like 112 288 IPR047201 GO:0000175
Vimu5g00545 295 Gene3D - 99 295 IPR036397 GO:0003676
Vimu5g00545 295 PANTHER 3'-5' EXONUCLEASE ERI1-RELATED 51 295 - -
Vimu5g00545 295 SUPERFAMILY Ribonuclease H-like 107 288 IPR012337 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu5g00545 Vimu-Chr5 5768292 5771678 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00545 5 5768292 5771678 Vimu5g00545 5 5768292 5771678 ECH