Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00524 TTGCTTCGTAAGCTAAACAAACCAAACACTGTTTCTTCGGATCGCTCTCAGCATCTCGTTACGAAAGCAACTCGTCACGTTTATACGGTGCCGTTTCGGGCTCTGTTTGGAACTCCGAATAAATTAGCTTTTGTTTTCGCTTTTGCGGAATCCGGTTCTGTGAAAAATTCAACTCCAAAACTTTTGGTTTTGTTAAAAGTTCTTTCTCTTTTGTTTTGTGTGTTTCGTTTGGTTTGTTTTGAAATGACAATGGCTGATGGTAATTACTATAGAAAGTCGAGCTGGGAAATAGATATGGGAGACGCTAGTTATGATAGAACTTTGAGAGAGTTCTGTATTCCGGATTACATATTAGTGTCAGGATCTGAGGGAAAAAGTGTCTCGCCTGTACCTACGTGTCCTGTGATTGTTTTCATAAACTCCAAAAGTGGTGGCCAGCTTGGAGGGGAGCTTCTTGTTTCCTATAGTACACTTCTTAACAAAAACCAGGTTTTTGATTTGGGAAAAAATGCTCCGGATAAGGTGCTGCAGAAGCTTTATGCTACTTTGGAAACGCTCAAGCACAATGGGGATGATTTTGCAGCGCAAATTCAGAATAGATTGAGAATAATTGTTGCAGGTGGAGATGGTACTGCTAGCTGGCTTCTTGGAGTTGTATCTGACCTTAAATTACCTCATCCGCCACCAATTGCAACGGTGCCATTGGGGACGGGAAATAATCTTCCCTTTGCATTTGGATGGGGAAAGAAAAATCCAACCACGGATATTCAATCAGTGACGTCATTCCTAATGAATGTAAAAGCGGCAAAGGAAATGAAAATAGACAGCTGGCATATTGTTATGAGAATGAAGGCTCCAAAAGAAGGTTCATGTGACCCTATTGCACCCCTTGAGCTGCCTCACGCTATGCATGCATTTCAGCGTGTCTCTTCAACAGATAAGCTAAACATGGACGGTTACCACACTTTCCGTGGGGGATTTTGGAACTACTTTAGCATGGGAATGGATGCTCAAGTATCTTATGCATTTCATTCAGAGAGGAAATTACATCCAGAAAAGTTTAAAAATCAGTTATACAATCAGCGAATACAAAATAGGAATATAGGTCAGCTGGCAAAGGTCAAAATAATGAAAAAAGGTCATTGGGAAGATCTCCACATACCTCGCAGCATTCGGTCAATTGTTTGCCTGAACTTGCCCAGCTTTTCTGGTGGACTCAATCCTTGGGGAAAACCAAATAGGAAGAAATCAATTTATAGGGACCTGACTCTTCCCTATGTGGATGATGGCCTATTTGAGGTAGTTGGTTTTAGAGATGCTTGGCATGGTCTTGTTTTGCTTGCACCAAATGGACACGGGACTCGTTTGGCACAGACAAGCAGAATCCGATTTGAGTTTCACAAGGGTGCAGCTGACTGCACATTCATGAGAATTGACGGAGAGCCATGGAAACAACCACTCCCAAAAGATGATGACACAGTCGTTGTTGAGATATCACACCATGGTCAAGTTAGCATGCTTGCCACCCAATTGTGCCGTTCTAAAAGTATGTATGATCCCTCCTCACCTTCTATTGACCGGGAAGAAGATGATAGCACTGATGAAGAACTAGAAGAAGATTGCGAAGAACGCCGCAAATTTGGTGCAGCTGATACATTCAAATACCCTGATGGAATTGATATATCTCAAGTAAGTTAG 1698 0.4199 MLRKLNKPNTVSSDRSQHLVTKATRHVYTVPFRALFGTPNKLAFVFAFAESGSVKNSTPKLLVLLKVLSLLFCVFRLVCFEMTMADGNYYRKSSWEIDMGDASYDRTLREFCIPDYILVSGSEGKSVSPVPTCPVIVFINSKSGGQLGGELLVSYSTLLNKNQVFDLGKNAPDKVLQKLYATLETLKHNGDDFAAQIQNRLRIIVAGGDGTASWLLGVVSDLKLPHPPPIATVPLGTGNNLPFAFGWGKKNPTTDIQSVTSFLMNVKAAKEMKIDSWHIVMRMKAPKEGSCDPIAPLELPHAMHAFQRVSSTDKLNMDGYHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFKNQLYNQRIQNRNIGQLAKVKIMKKGHWEDLHIPRSIRSIVCLNLPSFSGGLNPWGKPNRKKSIYRDLTLPYVDDGLFEVVGFRDAWHGLVLLAPNGHGTRLAQTSRIRFEFHKGAADCTFMRIDGEPWKQPLPKDDDTVVVEISHHGQVSMLATQLCRSKSMYDPSSPSIDREEDDSTDEELEEDCEERRKFGAADTFKYPDGIDISQVS 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00524 565 PANTHER DIACYLGLYCEROL KINASE 113 510 IPR037607 GO:0004143|GO:0007165
Vimu5g00524 565 Pfam Diacylglycerol kinase catalytic domain 134 259 IPR001206 GO:0016301
Vimu5g00524 565 SMART dagk_c4b_2 329 482 IPR000756 GO:0004143|GO:0007205
Vimu5g00524 565 MobiDBLite consensus disorder prediction 515 549 - -
Vimu5g00524 565 FunFam Diacylglycerol kinase 133 276 - -
Vimu5g00524 565 Gene3D - 326 488 - -
Vimu5g00524 565 SMART dagk_c4a_7 134 277 IPR001206 GO:0016301
Vimu5g00524 565 Gene3D - 134 276 IPR017438 -
Vimu5g00524 565 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 130 283 IPR001206 GO:0016301
Vimu5g00524 565 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 132 486 IPR016064 -
Vimu5g00524 565 Pfam Diacylglycerol kinase accessory domain 327 482 IPR000756 GO:0004143|GO:0007205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00524 Vimu-Chr5 5470185 5477195 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00524 108 557 Acyl Lipid Metabolism Gene Families AT2G20900 68.619 0.0 649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g01881 4 20684246 20686771 Vimu5g00524 5 5470185 5477195 PCT