Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00478 ATGGAATCTGTTAAGCCATCAGCAGTGACACCAAGCAAAAGCAAGTTGGCTCGCACATTTGCCAAAGTTCTTCACGTTAGAGCAGTGACAGGAATTGCACCAGTTGATGGACTGAATAACGTTAAAGGGGATGCAGATCTCAAAAGTGAAGGAAATATAATCAAAGAAGATGAAGAGCTTCAGAAAAGAAAGGCCTCAGAAGCTTTGCTTGCAAAAGCATTTGCTAGCATTTCAACGGTGAAAGCTTCTTATGCTCAGCTGCAGCATGCTCAGTCTCCCTATGACCCTGATGTAATTCAAGCTGCTGATCAATTGATAGTCTCGGAGTTCAAGACCTTGTCTGAGCTAAAGCAATGTTTCTTTAAAAAGCAATTTGATCCTTCACCCGATAGAGCAATTCTTCAAGCTAAATTGAAGGAGCTGGAGAGTGTGAACAAAACATTTGAGATCACTGGGGAGAAGTTAGAATCACAAGCTCGGCTCAAGGAATCTGAGATTATATTTCTTCAAGAAAAGCTAGAGGAGACTAACAAGCAGAGCAGGTCAATTGAGAAGAGGTTAAATCAAAGTGGATCATTATCAGTTCTTGACAACCTCCACATTTCAGGACTAAGTCCTAATCATTTTCTTACTGTTCTTCGCCACACCGTTAGGTCCATTCGAAACTTTGTGAAGTTGTTAGTGAATGAGATGAGATCTGCAGATTGGGACATTGATGCTTCAGTGAATGCCATTATCGAGCAGAATGTGGTGTACTGGAAAGAAGATCACAAATGTTTTGCAATTGAGTCCTTTGTGTGCAGGGAGATGTTTGATTCTTTCAACTTCCCTAACTTCTCCCTACCCAATGAATCCCTGCCAGATAAAAACAAGAGGCAACTGTTCTTTGGGAGGTTCAATGAGCTAAAACCAGTGAAAGCAATGGAGTTTCTTTCAGGGAAGCCAAGATCACCCTTTGCAAAATTCTGCAGGATCAAGTTCTTGAGACTTGTTCATCCCAAGATGGAGGCATCATTCTTTGGCAATGTGAATCAGAGGAACATGCTGAATGGTGGAGAGTTTCCTGACACCAACTTCTTCACCTCATTTGCTGAGATGGCCAAGAGGGTGTGGCTTCTACACTGTTTGGCCTTCTCCTTTGAGCCTCAAGCTTCAATCTTTCAAGTGGAGAAGGGATGTAGATTCTCTGATGTGTACATGGAGAGTGTGAGTGAAAATGATGAAGAAATGGCAGTGGAATCTGAGCCAAGAGTTGCTTTCACTGTTGTTCCAGGCTTCAGGATTGGTAAAACTCTAATACAGTGCCAAGTCTACCTCTCACAAGTCATGCTTGTGCAGTGCATGGCTCTGCTTGTGGGGACTCACCCTTCTGCTGCCATGGTTCAATGA 1389 0.4284 MESVKPSAVTPSKSKLARTFAKVLHVRAVTGIAPVDGLNNVKGDADLKSEGNIIKEDEELQKRKASEALLAKAFASISTVKASYAQLQHAQSPYDPDVIQAADQLIVSEFKTLSELKQCFFKKQFDPSPDRAILQAKLKELESVNKTFEITGEKLESQARLKESEIIFLQEKLEETNKQSRSIEKRLNQSGSLSVLDNLHISGLSPNHFLTVLRHTVRSIRNFVKLLVNEMRSADWDIDASVNAIIEQNVVYWKEDHKCFAIESFVCREMFDSFNFPNFSLPNESLPDKNKRQLFFGRFNELKPVKAMEFLSGKPRSPFAKFCRIKFLRLVHPKMEASFFGNVNQRNMLNGGEFPDTNFFTSFAEMAKRVWLLHCLAFSFEPQASIFQVEKGCRFSDVYMESVSENDEEMAVESEPRVAFTVVPGFRIGKTLIQCQVYLSQVMLVQCMALLVGTHPSAAMVQ 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00478 462 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 12 440 IPR040225 GO:0009639|GO:0009959
Vimu5g00478 462 Pfam Plant protein of unknown function (DUF641) 62 186 IPR006943 -
Vimu5g00478 462 Coils Coil 138 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00478 Vimu-Chr5 4869999 4871582 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00478 5 4869999 4871582 Vimu5g00478 5 4869999 4871582 ECH