Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00476 ATGTCGTTTACGAAGTATTTGGAGACACTCTTTACACCGGAAATGGAAGTTGATGCGGCAACGATGATTTGTGTTGGAATTTTGATTTCATTTGTTATCATATTCTTAACAAAAGCACTGAGTTGGGCTTGGTTGGAACCGAAAAGGGCAGAGAGATTCCTCAGAAGACAAGGCATAAAGGGAAACCCATACAAGTTTTTCTTCGGAGACATGAAAGCAATGGGCATGATGCTGCATCAAGCACAATCTAAACCCATACAAATCGACGATGATGTTGCATGTCGCCTGGTTCCCTTTCAAAATCAATTGGTCAAAGAAAGTGAAAATAACTTGATAATTTTTGCAAGTAAGAATTCGTTTTTCTGGTATGGGCCTAAGATTGCAGTGAATATTATGGAGCCTGAAGCAATAAAGGAGATTCTGAACATGATAAATGACTTTCCAAAGCCAACCCTTAATCCACTTGCCAAGTTGCTGATAACAGGACTTGTAGATCTTGAGGGAGACAAATGGTCAAAGCACAGAAAGATCATCAACCCTGCATTTAATCTCGTTAAGCTCAAGCTTGTGTTGCCTGCCATGTATGATAGTTGCAACCAGATGATGAAGGAATGGAAGATGTTAGTGTGCGAAACAGGATCATGTGTGTTAGATGTCTGGCCATTCTTAAACAACTTGACAGCTGATGTGATTTCTCGTACAGCTTTCGGAAGTAACTATGAAGAAGGAAAAATAGTATTTCAACTCCTAAAAGAACAAGCTCAACTTACATCCAAGGTCTTTCAATCTATTTATATTCCAGGGTGGAGGTTTGTACCAACGAAATTGAACAAGAGGATGAAGAAGATTGACTATGAAATTGGAAATGTACTTCGTGGAATTATCCAAAAGCAAGAGGGTATTATGAAAACATGCAAAGCTTCCAGTGATAACCTATTAGGGTTACTATTGGAATCCAATCAAAACGAGATTGAAGTTGGATTACTTAAGAAAGATGTTGGAATGAACACCAATGATGTAATTAAGGAGTGTAAGTTATTTTACTTTGCCGGACAAGAAACAACATCGGTGTTACTAAATTGGACGATGGTGTTATTGAGTAGATTTCCCAAATGGCAAACACTGGCAAGAGAAGAAGTCATTGAAATTTTTGGCACAAAAGAACCTGACTATGATGGATTAAATCGTCTTAAAGTTGTCACAATGATTTTGTATGAGGTTTTAAGATTATATCCACCTGCTACTGCTATTACAAGAGTCATAAGGAAAGAAACTACAGTTGGAGATATGACTTTACCAACAGGAGCAGTAGCTTCTATTCCAATTGTGTTGGTACATCATGATTTTGAATTATGGGGAAGCGATGCAAAAGAGTTCAAACCAGAAAGATTCTCAGAAGGAATCTCAAAAGCAACAAATGGTAAAGTATCATTTATCCCATTTGGATGGGGTCCTCGAATATGCATTGGCCAAAACTTTGCTTTGCTTGAAGCCAAAATGGCTTTGTCTCTCATTCTGCAAAACTTCAAGTTTGAACTATCTTCCTCATATGTTCATGCTCCAATTACAGTCATAACTGCTCAACCTCAATTCGGCACACACCTTATATTACAAAAATTATACTTCCTTGAGAATGACGTTGATGACGGAGTTGATGACTTCATTACTTCGGTGGTGGCCTTTGGCTCAGTCTTTGGTTTCATTATAGTAGATGTTGATGCGTTCGAGTTGGAGTTCGAAGTCGCCAACAAAGAGGATAAAATGAAAAGGGAGACATTTTTTACATTGGAAATGGAACTTGATGCAGCGATGATGTCTGTTGGAATTTTGGTTGCATTTGTTATCATATTCTTAACGAAAGCACTGAGTTGGGTGTGGTTGGAACCGAAAAGGGCAGAGAGATTCCTCAGAAGACAAGGCATAAAGGGAAACTCATACAAGCTTGTCTTTGGAGACACAAAAGAATTAACCAAGATGCTGCATCAAGCACATTCTAAACCCATACACATCGATGATGATGTTGCAACTCGCCTAGTTCCATTTCAAAATCAATTGGTCAAAGTTTCTGGTAAGAATTCGTTTTTCTGGTATGGTCCTAAGATTACAGTGAATATTATGGATCCTGAAGCAATAAAAGAGGTTCTGAACATGATAAATGACTTTCCAAAGCCAAACCTTAATCCACTTGGCAAGTTCCTCATAACAGGACTTGTAGATCTTGAGGGAGACAAATGGTCAAAGCACAGAAAGATCATCAACCCTGCATTTAATCTCGTCAAGCTCAAGCTTGTGTTGCCGGCCATGTATGATAGTTGCAACCAGATGATGAAGGAATGGAAGATGTTAGTGTGCGAAACAGGATCATGTGTGTTAGATGTTTGGCCATTCTTAAACAACTTGACAGCTGATGTGATTTCTCGTACAGCTTTTGGAAGTAACTATGAAGAAGGAAAAATAGTATTTCAACTCTTAAAAGAACAAGCTAAACTTACATCCAAGGTCTTTCGATCTATTTACATTCCAGGGTGGAGGTTTCTACCAACTACATTAAACAAGAGGATGAAGAAGATTGACTTTGAAATTGGAAATGTACTTCGTGGAATTATCCAAAAGCAAGAGGGTATTATGAAAACATGCGAAGCTTCCAATGATAACCTATTAGGGCTACTATTGGAATCCAATCAGAAAGAGATTGAAGATCAAGGACTTAAGAAAGATTTTGGAATGAACACCAATGATGTAATTAAGGAGTGTAAGTTATTTTATTTTGCCGGACAAGAAACAACATCGGTGTTACTAAATTGGACGATGGTGTTATTGAGTAGATTTCCCAAATGGCAAACACTGGCAAGAGAAGAAGTCATTGAAATTTTTGGCACAAAAGAACCTGATTATGATGGATTAAATCGTCTTAAAGTTGTCACAATGATTTTGTACGAGGTTTTAAGATTATATCCACCAGTTACTGCAATTACAAGAATCCTAAGGAAGAAAGCTAAAGTTGGAAACATGACTTTACCAGCAGGAGCACTAGCTACTATTCCAGTTGTGTTGGTACATCATGATTTTGAATTATGGGGAAGTGATGCAAAAGAGTTCAAACCAGAAAGATTCTCAGAAGGAATCTCAAAAGCAACAAATGGTAAAGTTTCATTTATCCCATTTGGATGGGGTCCTCGAATATGCATTGGCCAAAACTTTGCTTTGCTTGAAGCCAAAATGGCCTTGTCTCTCATTCTGCAAAACTTCAAGTTTGAACTATCTTCCTCCTATGTTCATGCTCCAATTGTAGTCATAACTGCTCAACCTCAATTCGGCACACACCTTATATTACAAAAATTATAG 3345 0.3785 MSFTKYLETLFTPEMEVDAATMICVGILISFVIIFLTKALSWAWLEPKRAERFLRRQGIKGNPYKFFFGDMKAMGMMLHQAQSKPIQIDDDVACRLVPFQNQLVKESENNLIIFASKNSFFWYGPKIAVNIMEPEAIKEILNMINDFPKPTLNPLAKLLITGLVDLEGDKWSKHRKIINPAFNLVKLKLVLPAMYDSCNQMMKEWKMLVCETGSCVLDVWPFLNNLTADVISRTAFGSNYEEGKIVFQLLKEQAQLTSKVFQSIYIPGWRFVPTKLNKRMKKIDYEIGNVLRGIIQKQEGIMKTCKASSDNLLGLLLESNQNEIEVGLLKKDVGMNTNDVIKECKLFYFAGQETTSVLLNWTMVLLSRFPKWQTLAREEVIEIFGTKEPDYDGLNRLKVVTMILYEVLRLYPPATAITRVIRKETTVGDMTLPTGAVASIPIVLVHHDFELWGSDAKEFKPERFSEGISKATNGKVSFIPFGWGPRICIGQNFALLEAKMALSLILQNFKFELSSSYVHAPITVITAQPQFGTHLILQKLYFLENDVDDGVDDFITSVVAFGSVFGFIIVDVDAFELEFEVANKEDKMKRETFFTLEMELDAAMMSVGILVAFVIIFLTKALSWVWLEPKRAERFLRRQGIKGNSYKLVFGDTKELTKMLHQAHSKPIHIDDDVATRLVPFQNQLVKVSGKNSFFWYGPKITVNIMDPEAIKEVLNMINDFPKPNLNPLGKFLITGLVDLEGDKWSKHRKIINPAFNLVKLKLVLPAMYDSCNQMMKEWKMLVCETGSCVLDVWPFLNNLTADVISRTAFGSNYEEGKIVFQLLKEQAKLTSKVFRSIYIPGWRFLPTTLNKRMKKIDFEIGNVLRGIIQKQEGIMKTCEASNDNLLGLLLESNQKEIEDQGLKKDFGMNTNDVIKECKLFYFAGQETTSVLLNWTMVLLSRFPKWQTLAREEVIEIFGTKEPDYDGLNRLKVVTMILYEVLRLYPPVTAITRILRKKAKVGNMTLPAGALATIPVVLVHHDFELWGSDAKEFKPERFSEGISKATNGKVSFIPFGWGPRICIGQNFALLEAKMALSLILQNFKFELSSSYVHAPIVVITAQPQFGTHLILQKL 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00476 1114 PRINTS P450 superfamily signature 402 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00476 1114 PRINTS P450 superfamily signature 350 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00476 1114 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00476 1114 PRINTS P450 superfamily signature 488 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00476 1114 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Vimu5g00476 1114 FunFam Cytochrome P450 734A1 44 541 - -
Vimu5g00476 1114 Gene3D Cytochrome P450 625 1112 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00476 1114 PRINTS E-class P450 group I signature 339 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00476 1114 PRINTS E-class P450 group I signature 226 244 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00476 1114 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00476 1114 PRINTS E-class P450 group I signature 359 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00476 1114 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00476 1114 SUPERFAMILY Cytochrome P450 120 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00476 1114 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1055 1064 IPR017972 GO:0005506|GO:0016705
Vimu5g00476 1114 SUPERFAMILY Cytochrome P450 677 1112 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00476 1114 Gene3D Cytochrome P450 117 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00476 1114 Pfam Cytochrome P450 121 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00476 1114 Pfam Cytochrome P450 683 1088 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu5g00476 1114 FunFam Cytochrome P450 734A1 626 1114 - -
Vimu5g00476 1114 PANTHER CYTOCHROME P450 FAMILY MEMBER 36 532 - -
Vimu5g00476 1114 CDD CYP72 679 1110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00476 Vimu-Chr5 4799808 4819152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00476 14 540 Cytochrome P450 AT3G14690 53.220 0.0 585
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00476 5 4799808 4819152 Vimu5g00476 5 4799808 4819152 ECH