Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00474 ATGACTAATCACCTTGTTTTTTGTGCTTTTACTGTGCTTGCTCTCACTTGTTGTCTTCAGGTTCAAGCTCATGCTTCTCCTTCAGGATCATTGATCCAGCATCTGTCTTCACTTCTCAAATGGAGAAGGTCTAACTCCAAGACCCCTCAGTCAGATGGAAATGTTCTTCAATTTGAGAATGGTTATGTAGTGGAGACTGTTGTTGAAGGAAATGATATTGGGGTCGTTCCTCATAGGATCCGTGTTTCTGCCGAAAATGGTGAACTCTTTTCTGTTGATGCAATTAATAGCAACATTGTTCCAATCACCCCGCCCTTATCCCAATATAGTAGAGGAAGATTGGTGGCAGGGTCGTTTCAAGGCTACACTGGTCATGTAGATGGAAAACCAAGTGATTCTCGTTTCAATCATCCCGAAGGCATAACTGTGGATGATAAAGGGAATGTCTATGTTGCTGATACTCAAAATCTAGCTATCAGAAAGATTGGAGATGCTGGCGTGACAACCATTGCTGGAGGAAAGTCAAATGTTGCAGGCTACAGAGATGGTCCCAGTGAGGATGCTAAGTTCTCAAATGATTTTGATGTGGTGTATGTTCGTCCAACCTGTTCCTTGTTGGTCATAGATAGAGAAAATGCTGCTCTTCGCCAAATCATTCTCAACCAGGAGGATTGCAATTATCAGTCTAGTTCAATATCTATTGCAGATGTCCTCACAGTTGTTGGTGCTGTTTTAGTAGGATACGCTAGCTACATGCAGGTTTCAGCAAGGATTTGGATCATCTTTCTTCCCCAAAACACATTTCATTGTCATGTGCCACCATCAAAAGGTGAATTCAAAGGCCAAGACCATAAGGAAGAGACAAAATGGCCATCTTTTAGACAGCTTCTTTTGTATCTTTCTACTCTCTCCCTCAAAACATTTAGTTCTTTCTTTCAATTCATACCATGGCATTCCAAGTCTGATAGCACCAAGAGATGCCTGACACCGTTAAAAGATCCTCTTAAGAGGACACCGTTAAAAGATCGTCTTAAGAGGCCAGAAGATGAGGTAGAGGCCACCATGGCAGATAGGCAAAGGGCTTTTGATTCATTTCTTGCTGAAACTAAGCATGTTCATACTCCAAGCACAGCTGAGAAATATTCAGAAATGAGGTCTGCAAAGATAAAATCAAGCTCTTCCAAGGATCCCTCTTTCTTAAGAAAGCACCATTCATCGAAAAAACAGGAGTATGCTGAGTTCTATGGATCAACTGAGGTGCCATCTTATGCCAAATCTAAGAGACTTAAGCAAAGGTCTAAACATCGGCAAAAACGAGAAAAGGTTGGACATGATCTTTTGGAGGGTGTTGGAGCAGAGAAAAAACCAGTTAAGATGATGGGTGCTGACTATGTTACAATTTCAGATGAAGAAGATCACACAAAAAACTGGATGACCAAAAAATAA 1446 0.4122 MTNHLVFCAFTVLALTCCLQVQAHASPSGSLIQHLSSLLKWRRSNSKTPQSDGNVLQFENGYVVETVVEGNDIGVVPHRIRVSAENGELFSVDAINSNIVPITPPLSQYSRGRLVAGSFQGYTGHVDGKPSDSRFNHPEGITVDDKGNVYVADTQNLAIRKIGDAGVTTIAGGKSNVAGYRDGPSEDAKFSNDFDVVYVRPTCSLLVIDRENAALRQIILNQEDCNYQSSSISIADVLTVVGAVLVGYASYMQVSARIWIIFLPQNTFHCHVPPSKGEFKGQDHKEETKWPSFRQLLLYLSTLSLKTFSSFFQFIPWHSKSDSTKRCLTPLKDPLKRTPLKDRLKRPEDEVEATMADRQRAFDSFLAETKHVHTPSTAEKYSEMRSAKIKSSSSKDPSFLRKHHSSKKQEYAEFYGSTEVPSYAKSKRLKQRSKHRQKREKVGHDLLEGVGAEKKPVKMMGADYVTISDEEDHTKNWMTKK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00474 481 Gene3D - 38 219 IPR011042 -
Vimu5g00474 481 MobiDBLite consensus disorder prediction 373 403 - -
Vimu5g00474 481 MobiDBLite consensus disorder prediction 422 454 - -
Vimu5g00474 481 Pfam NHL repeat 135 161 IPR001258 GO:0005515
Vimu5g00474 481 PANTHER - 28 460 - -
Vimu5g00474 481 SUPERFAMILY Calcium-dependent phosphotriesterase 54 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00474 Vimu-Chr5 4757188 4760488 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00474 5 4757188 4760488 Vimu5g00474 5 4757188 4760488 ECH