Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00444 ATGGCATTCTATTTCGGGTTGTGTGCTCTGGTTTTTGCTGTTCTATTGTCAGTGGCATCTCCACTATACCTTGTGCAAGCCAATGCTTGTGATTTTTCTCTCGGAAATTGGGTTCTTGATGACTCCCACTACCCTCTCTATGATGCCTCAAGAGATTGCCCCTTCATCGGTCGGGGATTCAATTGCCTCAGAAATGGTAGACCTGATCAGGATTACCTCAAGTATAGATGGAAACCCTCTGGGTGTGATCTTCCCCGCAGATTTGATGGGGTGAATTTCTTGGAGAGATACAAAGGGAAGAAGATAATGTTTGTCGGGGACTCCATAAGCAACAACATGTGGCAATCATTAACTTGTTTGCTTCACAATGCTGTCCCAGAATCAAGTTATGCCTTATCAACACCCACAAAGTATCTTTCTGTGTTCACAATTCCGGAATTTGATGTTTCAATAATATGGTTGAAAAATGGGTTCCTAGTGGATGTGGTTCATGACAAAGAAAAGGGCAGGATTGTGAAACTGGACTCCATTAAATCTGGGTACATGTGGAAAGGAGATGTACTGATTTTCAATACCTATCATTGGTGGACCCACTTGAATGAGTCTGAAACGGTTCAGTTTCAAGTAGGCAATGAAACAATAAAGAACATGGATCCCATGGAAGCTTACAAGATTGGGTTAACAACTTGGTCTAAATGGATCGATGCTAACATTGATCCCTCGATGACAAAAGTTTTGTTCCAAGGAATTGCTGCATCCCATTTTCAGGGAGAGGGGTGTCTGAAAGAAACTAAGCCAGAAGAAGGAGCACAGCCACCTTATCCTGGTGTAGAAATTGTGAAGAATGTTTTGAGCAGTATGTCATATCCTGTGTATTTGCTTGACATTACATTTTTGACACAGCTGAGAATAGATGGCCATCCTTCTATATACACAGGCAAAGGCACCTCTTATGTGGACTGTAGTCACTGGTGTCTAGCTGGTGCACCTGATGCTTGGAATGAAATTTTGTTTGCTGTTCTGCTTGGACTTTAA 1035 0.4213 MAFYFGLCALVFAVLLSVASPLYLVQANACDFSLGNWVLDDSHYPLYDASRDCPFIGRGFNCLRNGRPDQDYLKYRWKPSGCDLPRRFDGVNFLERYKGKKIMFVGDSISNNMWQSLTCLLHNAVPESSYALSTPTKYLSVFTIPEFDVSIIWLKNGFLVDVVHDKEKGRIVKLDSIKSGYMWKGDVLIFNTYHWWTHLNESETVQFQVGNETIKNMDPMEAYKIGLTTWSKWIDANIDPSMTKVLFQGIAASHFQGEGCLKETKPEEGAQPPYPGVEIVKNVLSSMSYPVYLLDITFLTQLRIDGHPSIYTGKGTSYVDCSHWCLAGAPDAWNEILFAVLLGL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00444 344 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 87 339 IPR026057 GO:0016740
Vimu5g00444 344 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 17 337 IPR029962 GO:0016413
Vimu5g00444 344 Pfam PMR5 N terminal Domain 29 83 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00444 Vimu-Chr5 4320142 4322118 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00444 5 4320142 4322118 Vimu5g00444 5 4320142 4322118 ECH
Vimu4g01933 4 21409182 21410910 Vimu5g00444 5 4320142 4322118 PCT