Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00443 ATGAAGCTGGGGTGGGATTTAAAAAGTGGACTTAACAGAAAACTAAGAGCTTGGAAAGCATGGGATGATCCATCTTCTGGGGAGTTCACATGGGGAGTAGAGTTAGGAAGCAACCCTGATATCGTGATGAGGAAGGGTGAAACGGAGTACTTTAGGACAGGACCCTACACTGGGAACATGTTCAGTGGGGTATACGGTCCTAGAAACAACCCACTCTACGAATACGTATTCATCAACAACAAAGACGAAGTATATTACAGATACACCCTCAGAAACGCTTCCGTGATCACCATAATCGTGATGAACCAAACCCTTTATCTTCGCCACCGTCTTACGTGGATTCCCGAAGCCAAAGCTTGGACCATTTACCAGTCCCTCCCGATAGACAGTTGCGACGTCTACAACACTTGTGGGCCCAACGGAAAGTGTGCGATTGCAGGCTCACCCATTTGCCAGTGCTTGGATGGCTTCGTGCCCAAATCGTCTGAGCAGTGGAATGCCATGGATTGGAGAGAAGGGTGTGTGCGGAGTGCAGAATGGAAGTGTGGGATGAAAGACAGAGATGGGTTTCGCAGATTTCCTACTATGAAATTGCCCAACAGCACATTTTCTTGGGTGAATGCAAGTATGACACTTGAAGAATGTAGGAATAAGTGTTTGATGAATTGTTCTTGCAGTGGTTATTCCAATCTGGACACGAGAGGAGGAGGATCTGGCTGCTCTATTTGGTTTGATGGTAAACACGGGCGGAGGAAAAAGGTAATCGCGGTGGCTTCCGCCGTCGGATCGTTGGTGTTTGTGATGCTATTAACATTTTGCATTTACATGACCAAATTTAAA 840 0.4655 MKLGWDLKSGLNRKLRAWKAWDDPSSGEFTWGVELGSNPDIVMRKGETEYFRTGPYTGNMFSGVYGPRNNPLYEYVFINNKDEVYYRYTLRNASVITIIVMNQTLYLRHRLTWIPEAKAWTIYQSLPIDSCDVYNTCGPNGKCAIAGSPICQCLDGFVPKSSEQWNAMDWREGCVRSAEWKCGMKDRDGFRRFPTMKLPNSTFSWVNASMTLEECRNKCLMNCSCSGYSNLDTRGGGSGCSIWFDGKHGRRKKVIAVASAVGSLVFVMLLTFCIYMTKFK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00443 280 Gene3D Hepatocyte Growth Factor 181 256 - -
Vimu5g00443 280 SMART ntp_6 185 267 IPR003609 -
Vimu5g00443 280 CDD PAN_AP_plant 185 244 - -
Vimu5g00443 280 ProSiteProfiles PAN/Apple domain profile. 182 270 IPR003609 -
Vimu5g00443 280 Pfam S-locus glycoprotein domain 51 161 IPR000858 GO:0048544
Vimu5g00443 280 Pfam PAN-like domain 182 244 IPR003609 -
Vimu5g00443 280 ProSiteProfiles EGF-like domain profile. 127 163 IPR000742 -
Vimu5g00443 280 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00443 Vimu-Chr5 4308088 4309842 Transposed