Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00335 ATGGACACCAACACGAAAACTCTAAGATGGAAATTGCCAGAGTTTCGTAAACGTTTTATGAAACAATGCTTGGAAGGTGTACTGAAGCAAAGGTACGATGAACCTTCGACATCTGGGCTTGTTCGACAACTGGAAAGATATGAACTGAAACTGAATGGTGCTGCCGACAATGAGGCTGAGTACTGTTATTGGTTATCTAAAATGACAAAGGAACTATTTTCACAACAACCAATGAATGTTGTATCCAAACCTTGTTTCTCAAACTCTAATGCCTCAGGAGAAGTCTTCCCTGTTCAAGAAACTGGAAAATCTGCAAATATGGATTGGAAGGAGCAGGTTTACCAACAGATTCAAAAGATGAATAATGCCTATTTTTCAAAAGTTTATGTCTCTTATCTAGAGATGAATAGGGTGCTTCAACAGCTTGGGTATTTTCCTCAAGTATCAAATACAAATCTTTTGGAAAAACTGATAAAGAAAATGAAAAAAACAGAATGTGTTTTGACACTCTTCAAATTGAAGAAATGCCAAATAACCACCGATACAAAGAAGATTCTAGATGAAGCAGAAAAGTTTATACAATTTAATTTTTTCCCAAAGAATGTTTCTTCGGATCATCAAGGTCCATCACATTCTAGTATTTCTCCATTGAGAATAATGGAAACGAGACCATCAACCCAAGTATTGGGAACACAGAATTTTTATATATGGAAGGATGTTTCTCAACAAACCAAGCCGCTACAAGTGAAACCATCAACTCAACAAGTATTGGGAGCACAGAATTCTCATATATGGAAGGATGTTTCTCAGCAGACCAAACCGCTGCAAGCGAAACCATCAACTCAAGTATTGGAAGCACAAAATTCTCATATATGGAAGGATGTTTCTCAGCAAACCAAGCCGTTGCAAGCGAAACCATCAACTCAAGTATTGGGAGCACAAAATTCTCATATATGGAAAGATGTTTCTCAGCAAATCAAGCCGCAGCAAGCGAAAATAATACCCCAATCATTGGGAACACAGAACTCTTGTTTATGGAAGGATGTCTCTCATCAAAACAAGCCATACTTAAAGGAGCAGCAACTAAAAATAGTAGAAGCAAAACCATCTACACAACAATTGGGACCACAGAACTCTAGTATATTGAACCTGGTTTCTCAACAAAACAAGCCATGCTTAAAAGAGCAGCAAGTGGAAAAACAATATAGCAATTCCCCACAGCATGTAGATCAAGTGTCTATCATGAAAGGTCCTGACAATGCCGTAGAGAAGCAAGCCCAAGGTTCAGAGAAAGAAAGTGAAGCATTGAGGGTGGAGATTTCAGCTTCACCCTTGACCGAAAACTGCAATAAGCTTAAAGAATTTTCTGATAAATCTACGCTGAATTTTGATGAGCCAAGTGCTGAAGTGAAGCGCATTCTTAAATTGTTAGCCGTCATATCACCCGAAGCATTGAGCGCATCAGTTAATGAAATGAGAGAGGCAGTCTATTTGAATGATGTGATGGAAACTTCAGAGTTCTTAGATGAAGCACGAGAGATGGTTCAACAACAAAACCAAACTGGTAGGAAAAGGTCTCTAAGCCACAGTTTCAACCACTTGTCTGATGCTGAGGAATATAGAAAAAAGAAGCCAAGAATTTTGGAAAATTCTTCTCTTTTAGAAGAATTAAAGGAGATCAACCATCGATTGGTAGACAGTGTGATTGTTGTTGGAGAAAATGTAGCGTCTGAAGATAGTGAAGGGTTGGTTATCGAATTCCTTTTCAATGCAGTATCGTTCAATATGAACGTAGAATCTCATATTTTTGCAGATAAAAAGTCAATAATCAAACCATTAAGGTTGTTCGTTCCTACAAATTATCCAACTTCTTTGCCTGTTATTGTAGACAAAGAGCTGTCAGAAGTCAGTACTGAATGCCAGAAAGACCTATCAACAATAGCAAAATCAAAGCTGATTCATTTTCTGAGATGCTTGGATCGGACATGGTCACTTGAGGATATAGCAATGTCATGGGAACGTTGTGCCAGAGAAACAGTTCTTGAGTGTGCAAAAACCTTTGGAGGAGAAACTTTTAGCTCAAAATATGGAGGGTGGGAAAATTATCAAATTCAAGTCTAA 2121 0.38 MDTNTKTLRWKLPEFRKRFMKQCLEGVLKQRYDEPSTSGLVRQLERYELKLNGAADNEAEYCYWLSKMTKELFSQQPMNVVSKPCFSNSNASGEVFPVQETGKSANMDWKEQVYQQIQKMNNAYFSKVYVSYLEMNRVLQQLGYFPQVSNTNLLEKLIKKMKKTECVLTLFKLKKCQITTDTKKILDEAEKFIQFNFFPKNVSSDHQGPSHSSISPLRIMETRPSTQVLGTQNFYIWKDVSQQTKPLQVKPSTQQVLGAQNSHIWKDVSQQTKPLQAKPSTQVLEAQNSHIWKDVSQQTKPLQAKPSTQVLGAQNSHIWKDVSQQIKPQQAKIIPQSLGTQNSCLWKDVSHQNKPYLKEQQLKIVEAKPSTQQLGPQNSSILNLVSQQNKPCLKEQQVEKQYSNSPQHVDQVSIMKGPDNAVEKQAQGSEKESEALRVEISASPLTENCNKLKEFSDKSTLNFDEPSAEVKRILKLLAVISPEALSASVNEMREAVYLNDVMETSEFLDEAREMVQQQNQTGRKRSLSHSFNHLSDAEEYRKKKPRILENSSLLEELKEINHRLVDSVIVVGENVASEDSEGLVIEFLFNAVSFNMNVESHIFADKKSIIKPLRLFVPTNYPTSLPVIVDKELSEVSTECQKDLSTIAKSKLIHFLRCLDRTWSLEDIAMSWERCARETVLECAKTFGGETFSSKYGGWENYQIQV 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00335 706 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 99 695 IPR044661 GO:0003713|GO:0031490
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00335 Vimu-Chr5 3088306 3091724 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00335 5 3088306 3091724 Vimu5g00335 5 3088306 3091724 ECH