Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00331 ATGAGAGCATCAACCTCTTCAATTCCCATTCCATCGTCGTCTTCGCGTTTCTCCATCTTCTTCTTCCTTCTATTCGCGCTCCTCGCCCTTCGATCTTCATCCAGCGACTGCTCACACTTCCAACACCAGGAGCCGATGGCCACTGTCGGAGGCGTGCGTGACTCCCCAGGGTCTCAGAACAGCGTCGAGACTGAATCTCTCGCGCGATTCGCGGTCGACGAGCACAACAAGAAACAGAATTCGCTTCTGGAGTTTGCTAGGGTTGTGAAGGCACAGGAACAGGTTGTTGCTGGTACCCTGCATCACCTTACTCTTGAGGCTATTGAGGCTGGTGAGAAGAAGCTCTATGAAGCCAAGGTATGGGTGAAACCATGGCTGAACTCCAAAGAACTTCAAGAGTTTAAGCCTGCCGGTGTTGCATCACCATTTACCTCTGCTGACCTTGGTGTCAAAAAGGATGGCCACAAATCAGGATGGCAATCTGTGCCAACACATGACCCTCAAGTTCAAGATGCAGCTAATCATGCAATCAGGACAATCCAGCAAAGGTCTAATTCATTAGTACCCTATGTGCTTCATGAGGTTGCTGATGCAAAGGCTGAGGTGATTGATGATTTTGCCAAGTTTAATCTGCTTCTCAAAGTCAAAAGGGGAGACAAGGAAGAGAAATTCAAGGTAGAAGTACACAAGAACAACGAAGGGGCACTCCATCTAAATCAGATGGAACAAGATCATTCCTAA 741 0.4818 MRASTSSIPIPSSSSRFSIFFFLLFALLALRSSSSDCSHFQHQEPMATVGGVRDSPGSQNSVETESLARFAVDEHNKKQNSLLEFARVVKAQEQVVAGTLHHLTLEAIEAGEKKLYEAKVWVKPWLNSKELQEFKPAGVASPFTSADLGVKKDGHKSGWQSVPTHDPQVQDAANHAIRTIQQRSNSLVPYVLHEVADAKAEVIDDFAKFNLLLKVKRGDKEEKFKVEVHKNNEGALHLNQMEQDHS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00331 246 Gene3D - 46 142 - -
Vimu5g00331 246 CDD CY 50 136 IPR000010 GO:0004869
Vimu5g00331 246 SUPERFAMILY Cystatin/monellin 154 234 IPR046350 -
Vimu5g00331 246 FunFam Cysteine proteinase inhibitor 46 144 - -
Vimu5g00331 246 SUPERFAMILY Cystatin/monellin 47 138 IPR046350 -
Vimu5g00331 246 SMART CY_4 47 137 IPR000010 GO:0004869
Vimu5g00331 246 Pfam Aspartic acid proteinase inhibitor 64 136 IPR000010 GO:0004869
Vimu5g00331 246 FunFam Cysteine proteinase inhibitor 156 245 - -
Vimu5g00331 246 PANTHER CYSTATIN FAMILY MEMBER 43 193 IPR027214 GO:0004869
Vimu5g00331 246 ProSitePatterns Cysteine proteases inhibitors signature. 93 106 IPR018073 -
Vimu5g00331 246 Gene3D - 150 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00331 Vimu-Chr5 3051792 3055827 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00331 5 3051792 3055827 Vimu5g00331 5 3051792 3055827 ECH