Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00329 ATGGAGAAGATAAACATAAAGCAAGTGAGAAGCATAGCAAAGATAGTGGGAACATTAGTGACAGTTGCAGGGGCTATGCTAATGACCTTATACAGAGGTCCTATAGTGGAGATGGTTTGGATCAAACAAGCTCACTATAAAAGCAATGGAACAACAAGCACAGGATCATTGGACAGAGATTGGTTATTGGGTTGCATTTTTCTCATCATTTCCACCATTGCTTGGGCTTCACTCTTTGTTTTACAAGCAAAAGCTATACAGACATACAAGAATCATCAGCTAACCTTAACTTCACTTGTGTGCTTTATAGGCGCAGTTCAAGCTATTGTTGTTACTTATGTTGTTGAACACAATCCTTCAGTTTGGAAAATCGGATGGGATATAAACTTACTTACTGCTGCATATTCAGGGGTTGTTTCATCAAGCATATCATACTATGTACAAGGACTGGTAATCAAGAAGAAAGGACCTGTCTTTGCAACTTCCTTTAGCCCTTTAATGATGATCATTTCTGCTATCATGGGTTACTTTATCCTTGCAGAAAAAACTTATCTTGGAGGTGTGATTGGTGCCATCTTAATTGTTATAGGTTTATACTCAGTTCTATGGGGAAAGCACAAAGAACAAGTAGAGAATCAAGTGGAAGCTCAAATTCCCTTGCCTGTAAATGATGCTGAAAGTTCAGTAGCAGAAGAGCAAAATATGGTTGATGCTAGAGATTATTTCACTGAAGAAAAACATGATCAGAAAGTAGAACCCATCAATATCAAGTTTTCTTCAATTGTAATTACGTTGTCTATTCAAGAATCTCCTACTAGATAA 822 0.3723 MEKINIKQVRSIAKIVGTLVTVAGAMLMTLYRGPIVEMVWIKQAHYKSNGTTSTGSLDRDWLLGCIFLIISTIAWASLFVLQAKAIQTYKNHQLTLTSLVCFIGAVQAIVVTYVVEHNPSVWKIGWDINLLTAAYSGVVSSSISYYVQGLVIKKKGPVFATSFSPLMMIISAIMGYFILAEKTYLGGVIGAILIVIGLYSVLWGKHKEQVENQVEAQIPLPVNDAESSVAEEQNMVDARDYFTEEKHDQKVEPINIKFSSIVITLSIQESPTR 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00329 273 SUPERFAMILY Multidrug resistance efflux transporter EmrE 126 207 - -
Vimu5g00329 273 Pfam EamA-like transporter family 63 202 IPR000620 GO:0016020
Vimu5g00329 273 PANTHER WAT1-RELATED PROTEIN 1 215 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00329 Vimu-Chr5 3037462 3038654 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00329 1 270 Nodulin-like Gene Family AT5G07050 54.909 4.00e-97 289
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00329 5 3037462 3038654 Vimu5g00329 5 3037462 3038654 ECH