Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00326 ATGGTCAACCAGAAGAAGCTCGTTGATGAAGTGTCGGGTTGGCTTAGAGTCTACGACGACGGTTCGGTAGACCGAACATGGACCGGTCCTCCAGAGGTCAATTTCATGGTCGAACCGGTTCCTGCCCACGCCGAATTCATCAATGGAGTTGCTGTTCGTGATACTGTCACGAACAACAATCTCCGTGTACGACTTTACTTGCCGGAGAAAGTCTCTAACGAGGAGAAGCTTCCCATTTTTCTTCACTTTCATGGTGGCGGGTTTTGCATAAGTGAACCGGATTGGTTCATGTACTATCAGTTTTACTCACAGCTTGCTCGGTTAGCTCGAGTCATCGTTGTGTCTTGTTTCCTTCGCCGTGCTCCAGAAAATCGTCTTCCTGCAGCAATTGACGACGGGTTTTCTGCTCTTCTCTGGCTACAGGATGTAGCTGGAAGAGAAACGGAAGAGCCGTGGCTTGAAAAACACGGTGATTTTCGTCGTGTTTTTCTGATCGGAGATAGCTCCGGTGCAAATATTGTGCATGAAGTGGCTGCTCGAGCTGGGAAGACACAACTGAAGCTGATAAACGTAACTGGAGGAATCCCTATTCATCCGGGGATGATGAGGTCGACACGGAGCAGGTCAGAGTTGGAAAAACCACAATCTCCATTTTTGACTTTGGACATGGTGGATAAGTTCATGAGCTTGGCATTGCCATTGGGTTCAACCAAGGACCACCCCATTGCGTGCCCGATGGGTGACAGCGCTCCGCCGCTGAGCGGGCTGAAACTGCCGCCGTTTCTGCTGTGCCTGGCGGAGATGGACTTGATCTTTGACACAGAGATGGAGTACTACGAAGCCATGCGGAAGGCCAACAAGGATGTGGAGTTGTATGTTAACGAAGGAGTGACTCATTGTTTCTATCTCAACAAAATGGCAGTGGACATGGATCCAAACACTGGTGCTCAAACGCATGATCTTATGGCTAGAATCAAACAGTTCGTTGAAGAGCACTAA 999 0.4925 MVNQKKLVDEVSGWLRVYDDGSVDRTWTGPPEVNFMVEPVPAHAEFINGVAVRDTVTNNNLRVRLYLPEKVSNEEKLPIFLHFHGGGFCISEPDWFMYYQFYSQLARLARVIVVSCFLRRAPENRLPAAIDDGFSALLWLQDVAGRETEEPWLEKHGDFRRVFLIGDSSGANIVHEVAARAGKTQLKLINVTGGIPIHPGMMRSTRSRSELEKPQSPFLTLDMVDKFMSLALPLGSTKDHPIACPMGDSAPPLSGLKLPPFLLCLAEMDLIFDTEMEYYEAMRKANKDVELYVNEGVTHCFYLNKMAVDMDPNTGAQTHDLMARIKQFVEEH 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00326 332 Pfam alpha/beta hydrolase fold 81 302 IPR013094 GO:0016787
Vimu5g00326 332 SUPERFAMILY alpha/beta-Hydrolases 7 330 IPR029058 -
Vimu5g00326 332 PANTHER ARYLACETAMIDE DEACETYLASE 9 303 - -
Vimu5g00326 332 Gene3D alpha/beta hydrolase 5 330 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00326 Vimu-Chr5 2995651 2996649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu5g00326 7 330 Carbohydrate Esterase AT5G16080 35.417 6.30e-58 189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00326 5 2995651 2996649 Vimu5g00326 5 2995651 2996649 ECH
Vimu4g02170 4 23990885 23999480 Vimu5g00326 5 2995651 2996649 PCT