Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00286 ATGGCTACCCAGACAATAGCTGAAACTGCACAAAAACTTGTCAACCCTGAAGCTCTTCGCTATGCAGCCAAACAATCAGAGCGCTGCCTTGTTATTCCTGTCCGTCTCCGTCGTGCTATTAAAAAATACCTTAAAGAGCAGGAGGAGCCATATATGAAGAGTAAAGTCTTGAGACTGTCTCAATCATTTAATCAAATCAAGGATGTCAATCTACAGTTGGCAAGCACCACAGCAAAGAAGATAGTTGAAGACCCTTTAAAGTCTCTCGAACAATCAAAACGTTGGAAGATTACGAGCTCTTATGGGGACATTGGTCTCATGTATAGAGATGATGAGACAATGGCTTATGTGGCTTCTAGAATGCCTGCTGTTTACTCTGCTTGTTACAGAGTACTTAAAGAGGGATTAGTGATAAATGCACTCTCTTACGAGATTGATTCAGATGAGGGCAGTTTTGCATATCCGAAGCAAGAATTTTGGGAAAAAGTTCGCAGAAGGCTTCCTGGTTTCTCCCCATCTAAGGTATTAGATTTTGGTGCCGGGACTGGTTCAGCTTTCTGGGCACTACAAGAAGTTTGGCCAAAATCTTTGGAGAAAGTTAATTTAATAGAACCATCACAATCAATGCAGCGTGCAGGTCGGAGCCTTGTACAAGGTCTCAAGAATTTGCCTCTTATTCATAGCTATGATAGCATTCAAGCACTTTCTAAAAGTATTGGTAAATCAGACAGAGGGCATGACCTTGTAATTGCTTCTTATGTTCTTGGAGAGATTCCATCAATAAAGGATCGAATAACCATAGTTCGCCAACTTTGGGATCTAACAAGTGATCTTCTGGTCTTGGTTGAACCAGGAACACCTCATGGATCTAACATTATTGCTCAGATGAGATCTCACATATTATGGATGGAAGAAAGAAAATATCGTAAAGCATCTCATAAGAATAATGAAGTTTGTAAAGATTTGATCACTCAGAAGTCTGGTGCGTTCGTGGTTGCCCCTTGTCCTCATGATGGGATTTGTCCGCTGGTAAAATCTGGAAAATATTGTCATTTTGTTCAACGCTTAGAGAGGACTTCATCGCAACGTGCCTACAAGCGTTCAAAGGGTGATCCTTTACGTGGTTTTGAAGATGAGAAATTTTCCTATGTTGTTTTTAGACGTGGACCAAGGCCAAGGCAAGTGGAACCTTGGCCCCTTGACGGTGTGGAATTTGAGACTCTGAAGGAGCAGCATGCAAAAAGAAATCCAGAGGATCTTGAAATTGACTATGAGGACTGGATGAAGTTGCAACAAGCTGATGATACTCTTCATGAAGTAGCTGATGCAGCAGATGATTTGGAAACTGGTGACACTTCTTGTGAAGCAGTTAACGCTGTAAGTTATGACTCCGATGCTGTGGAAACTGACGGTGATGATGATAGTGACAATGACTACGAAAGGAGAGAAGAGAGAGCCAGTGCTGATCTTGGAGGTGGCTGGGGCAGGATTGTCTTCATGCCTGTCAGAAGGGGCAGACAGGTCACAATGAATGTGTGCAGATCCACCAAAAAGGATGCCTCAGAGGGTTCATATGATCGTATTGTCGTCACAAAGAGCAAGAATCCTACCTTGCATCATCAGGCCAAAAGATCTATCTGGGGTGACCTTTGGCCCTTTTGA 1662 0.4266 MATQTIAETAQKLVNPEALRYAAKQSERCLVIPVRLRRAIKKYLKEQEEPYMKSKVLRLSQSFNQIKDVNLQLASTTAKKIVEDPLKSLEQSKRWKITSSYGDIGLMYRDDETMAYVASRMPAVYSACYRVLKEGLVINALSYEIDSDEGSFAYPKQEFWEKVRRRLPGFSPSKVLDFGAGTGSAFWALQEVWPKSLEKVNLIEPSQSMQRAGRSLVQGLKNLPLIHSYDSIQALSKSIGKSDRGHDLVIASYVLGEIPSIKDRITIVRQLWDLTSDLLVLVEPGTPHGSNIIAQMRSHILWMEERKYRKASHKNNEVCKDLITQKSGAFVVAPCPHDGICPLVKSGKYCHFVQRLERTSSQRAYKRSKGDPLRGFEDEKFSYVVFRRGPRPRQVEPWPLDGVEFETLKEQHAKRNPEDLEIDYEDWMKLQQADDTLHEVADAADDLETGDTSCEAVNAVSYDSDAVETDGDDDSDNDYERREERASADLGGGWGRIVFMPVRRGRQVTMNVCRSTKKDASEGSYDRIVVTKSKNPTLHHQAKRSIWGDLWPF 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00286 553 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 148 299 IPR029063 -
Vimu5g00286 553 PANTHER 37S RIBOSOMAL PROTEIN S22 161 553 - -
Vimu5g00286 553 Gene3D Vaccinia Virus protein VP39 146 320 IPR029063 -
Vimu5g00286 553 Pfam Mitochondrial small ribosomal subunit Rsm22 488 552 IPR015324 GO:0006412|GO:0008168
Vimu5g00286 553 Pfam Mitochondrial small ribosomal subunit Rsm22 159 307 IPR015324 GO:0006412|GO:0008168
Vimu5g00286 553 Pfam Mitochondrial small ribosomal subunit Rsm22 316 396 IPR015324 GO:0006412|GO:0008168
Vimu5g00286 553 MobiDBLite consensus disorder prediction 461 486 - -