Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00219 ATGGAATCTGAGCGCCGCACCGTCCGCACCCTAGTCTCGAAGCTCAGCTCCGTCTCCGAAGCCGCTCGCGTCGATGCCCTCTGCCAGCTTCGCCTCATGTCCAAGCAGGACCCGCAAACCCGACCCGTAATCTCCGAAGCTGGCGCAATCCCTTATATAGCGGAAACCCTCTACTCTTCCTCTCACACTTCCCAAGAGAACGCAGCGGCCACGCTGCTCAACCTCTCCATCACGGAGAAGGAGCCTCTCATGTCGACGCGTGGCGTCCTTGACGCGATCGCCCACGTGATCTCGCACCACGCCACCACCTCATCGCCCGCCGCCGTACAGTCCGCTGCCGCCACCATACACAGCCTCCTCTCATCCGTCGACGCTTACCGTCCCGTCGTCGGCTCGAAGCGCGAGATCGTGTACTCGCTAGTCGATATCCTCCGTTGCCATGCGTCCTCCCCTCCGCGCACGATCAAGGACGCGCTCAAGGCGCTCTTCGCCATCGCGCTCCACCCGCTCAACCGCGCCACGATGATCAACCTCGGCGTGGTTCCCGCGTTATTTTCGCTCGTCGTTAAGGACGGTAGGGTCGGCATCGTGGAGGACGCGACGGCGGTGGTTGCGCAGGTTGCGGGATGTGAAGATGCCGCCGAGGCCTTCCGTAAAGCATCTGGCGGCCTCGGCGTGCTCGCCGACCTTCTTGACCTGGCCACTGCCGCCAGCATGCGCACCAAAGAGAATACCGTCTCGGCTCTCCTTAATCTTGTGCGCTGCGGTGGGGAGAAGGTCGCCGCGGATGTGCGCGACGCAGTGGCCTTCGGAGCGCTGGACGGAATTAGGGACGTTAGGGACGGCGGCAGTGCCAAGGGGAGGACGAAGGCCGCGGAATTGTTGAAGGTCTTGCTTGGTGAGAGCAATGGCACTGTCGATGTGGCGTTGAGTAGTGATAACTGTTCTTCCTTTGGTTCCTCGAGGAATCATGATTCGGATTGA 984 0.6169 MESERRTVRTLVSKLSSVSEAARVDALCQLRLMSKQDPQTRPVISEAGAIPYIAETLYSSSHTSQENAAATLLNLSITEKEPLMSTRGVLDAIAHVISHHATTSSPAAVQSAAATIHSLLSSVDAYRPVVGSKREIVYSLVDILRCHASSPPRTIKDALKALFAIALHPLNRATMINLGVVPALFSLVVKDGRVGIVEDATAVVAQVAGCEDAAEAFRKASGGLGVLADLLDLATAASMRTKENTVSALLNLVRCGGEKVAADVRDAVAFGALDGIRDVRDGGSAKGRTKAAELLKVLLGESNGTVDVALSSDNCSSFGSSRNHDSD 327
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00219 327 Gene3D - 1 283 IPR011989 -
Vimu5g00219 327 PANTHER U BOX DOMAIN-CONTAINING 7 298 - -
Vimu5g00219 327 SUPERFAMILY ARM repeat 7 299 IPR016024 -
Vimu5g00219 327 SMART arm_5 37 77 IPR000225 GO:0005515
Vimu5g00219 327 SMART arm_5 168 209 IPR000225 GO:0005515
Vimu5g00219 327 SMART arm_5 210 254 IPR000225 GO:0005515
Vimu5g00219 327 Pfam Armadillo/beta-catenin-like repeat 38 76 IPR000225 GO:0005515
Vimu5g00219 327 FunFam ARM repeat superfamily protein 2 303 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vimu5g00219 Vimu-Chr5 2067291 2068274 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00219 5 2067291 2068274 Vimu5g00219 5 2067291 2068274 ECH