Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00216 ATGGGACGAGCTTCAACATTCCTTATAATTTTTATAGTTCTTGGTTCTTCCTTTGCCACGTACAATCTGGTAACAATGCTAAGGCGCTATGGGTCTTCGGAAGGTGTAGCTGTTTCTGATGGTGGATTGTTTTTTGACCCCATTTTTGAGATGCCTGATCATGTAAAGAATCGGAAGACATCTAAAGCACCTTTTCATGTGGCATTAACGGCAACAGATGCTCCATATAACAAATGGCAGTGCCGGGTCATGTATTACTGGTATAAGCAACAAAAGAAGTTACCTGGGTCAGAGATGGGAGGATTCACTAGGATTCTACATTCTGGAAAATCTGACAACTTGATGGATGAAATTCCTACTGTTGTGGTTGATCCTCTTGCAGCAGGTTTGGACCGGGGATACATCGTTCTGAATAGGCCATGGGCCTTTGTTCAGTGGCTGGAAAAGGCTAAAATAGAGGAAGAATATGTGTTAATGGCAGAGCCTGATCATATATTTTTACGCCCTTTGCCCAATCTGGCCTATGGAGGACATCCAGCTGCTTTTCCATTTTTTTACATCAAACCTGATCAGAATGAAAAAATCATTAGGAAGTTTTATCCTGAGGAATATGGACCAGTTACAAATGTTGACCCAATTGGCAATTCTCCTGTAATTATCAGGAAGATTTCTTTCTCAGTATCTGAAGATCTTAATGCCGATACATTTCATATTGATGATAGACCTAGTTCAGAATCTATAGAAAGAATGAATTTTTGTTCATGGATCCTATCAGCCAATGACTTGATATCAAAGATTGCTCCTACTTGGATGAATGTCTCTTTGAAGATGAAAGAGGACCCAGAGACTGATAAGGCTTTTGGATGGGTGCTAGAAATGTATGCTTATGCCGTTGCATCTGCTCTGCATGGTGTGAGGCACATTCTGCGGAAAGACTTCATGCTGCAGCCACCCTGGGATCTTGAAACTAGAAAGAAATACATACTTCATTATACTTACGGGTGTGACTACAATATGAAGATACCCTTTTGTCTCACTAGTGTGTTTCATGATGCTCAGGGTGAATTGACTTATGGCAAAATTGGTGAGTGGAGATTTGACAAAAGGTCACATCTACGAGGACCTCCACCAAAAAACTTGCCTTTGCCCCCACCAGGAGTTCCTGAAAGTGTGGTGACCCTTGTAAAGATGGTGAACGAAGCTAGTGCGAACATTCCAAACTGGGAGACAACGTAA 1236 0.415 MGRASTFLIIFIVLGSSFATYNLVTMLRRYGSSEGVAVSDGGLFFDPIFEMPDHVKNRKTSKAPFHVALTATDAPYNKWQCRVMYYWYKQQKKLPGSEMGGFTRILHSGKSDNLMDEIPTVVVDPLAAGLDRGYIVLNRPWAFVQWLEKAKIEEEYVLMAEPDHIFLRPLPNLAYGGHPAAFPFFYIKPDQNEKIIRKFYPEEYGPVTNVDPIGNSPVIIRKISFSVSEDLNADTFHIDDRPSSESIERMNFCSWILSANDLISKIAPTWMNVSLKMKEDPETDKAFGWVLEMYAYAVASALHGVRHILRKDFMLQPPWDLETRKKYILHYTYGCDYNMKIPFCLTSVFHDAQGELTYGKIGEWRFDKRSHLRGPPPKNLPLPPPGVPESVVTLVKMVNEASANIPNWETT 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00216 411 PANTHER PEPTIDYL SERINE ALPHA-GALACTOSYLTRANSFERASE 15 222 IPR044845 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00216 Vimu-Chr5 2035209 2038372 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g00216 5 2035209 2038372 Vimu5g00216 5 2035209 2038372 ECH