Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00213 ATGGCTGGTTTTGATTTTCATGAAACATTTTCACCAGTCATCAAACCTGTTACTATTTGCATAATTTTAATTGTTGCTCTTTCTTTTGGGTGGAAGTTGTTTCAACTGAACGTGAATAATGCCTTTTTGAATGGTATTTTGGAAGGAACTGTCTATATGCAGCAACCTCCTAGTTTTGAGGTGGCTGACAAGACTATTGTCTGCAAGTTAAATAAGGCGCTCTATGGGCTCAAGCTAGCCCCAGACAATGGTTCAATCGCTTACAGCACACTCTTCATCAGCTCGGACCCTACCTTATATAGGTCTGTGGTGGGGATGTTGCAGTATGCTACTCTTACACGGCCCGAAATCAGCTTTGCTGTAAATAAAGTCTGCCAGTTTATGGCACAACCTCTTGACTCTCACTGGAACCCAGCGGCTTTTAATTGTTCTGTACCCCTGCTCGCTCCAGCACTGAAGCTAAATACAGAATCTCCATTCCACATAACCCAGTTTTTCACAACAGGACCAACCAAACAAATGGAAATTGATGTGTTCTTTGTTCGTGAGAAGACTTTGTTGAAGCAGCTGCAAGTCTCTCATGTTCCAGACCTTGATCAGTGGGCATATGCCCTGACAAAGCCTCTCTCTTCCTCTTGGTTCATTTTTCTACGTTCCAAACTCAATGATTTGATTAACAAAGTTGGCCATACCTTGAGCGAATGGATTTATATTGGTGGTGTTAAAGCTTTTGCTGATGGGTCTTTGGGTTCCAATAGTGCATTGCTTTATGAGCCATATGTTGATGAGCCAGACAACTATGGTTTACAAGTGACTGAACCTGAAGCACTTCTCAACATGACCTTGGAGTCTGATTTATATGGTCTACAGGTCGCTATTCATGCTATAGGAGACAAAACAAATGACCTTATCTTGGACCTATATAGTTCAGTAGCTTCTGCAAATGGTATGAGAGATCGAAGATTCAGGATTGAGCATGCCCAGCAGTTGGCAGCCGGAACCCCTGGCCGATTTGGTAAACAAAGGGTTGTTGCTTCCATGCAGCCAGATCAATTGTTGGATGATGCTGACTCTACTAGCAAAAAGCTTGGCAAGGATAGGGCAGACACAGAATCATATTTATTTCGGTCACTCTTAAATAACAATGCATTAGTGGCATTTGGTTCTGACTGGCCGGTGGTAGACATCAATCCCTTAAGTGGCATTAAGACAGCAATGAAGAGGAAGCCTCCCACTTGGAAAAGTGCATGGATTCCATCCGAATGCATTTCACTAGATGATGCAATAAAGGCTTACACCATTTCTGCTGCTCATGCAAGCTTCCTTGACAAAGATCTTGGGTCCTTATCTCCAGGGAAACTGGCAGATTTTGTCATATTGTCCACTGATTCATGGCAAGACTTTGCTGAAGATGCATCTGCATCTATTGAGCAAACATACGTTTCTGGTGTGAGAGCATATCCTTGA 1467 0.4281 MAGFDFHETFSPVIKPVTICIILIVALSFGWKLFQLNVNNAFLNGILEGTVYMQQPPSFEVADKTIVCKLNKALYGLKLAPDNGSIAYSTLFISSDPTLYRSVVGMLQYATLTRPEISFAVNKVCQFMAQPLDSHWNPAAFNCSVPLLAPALKLNTESPFHITQFFTTGPTKQMEIDVFFVREKTLLKQLQVSHVPDLDQWAYALTKPLSSSWFIFLRSKLNDLINKVGHTLSEWIYIGGVKAFADGSLGSNSALLYEPYVDEPDNYGLQVTEPEALLNMTLESDLYGLQVAIHAIGDKTNDLILDLYSSVASANGMRDRRFRIEHAQQLAAGTPGRFGKQRVVASMQPDQLLDDADSTSKKLGKDRADTESYLFRSLLNNNALVAFGSDWPVVDINPLSGIKTAMKRKPPTWKSAWIPSECISLDDAIKAYTISAAHASFLDKDLGSLSPGKLADFVILSTDSWQDFAEDASASIEQTYVSGVRAYP 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00213 488 Gene3D - 193 445 - -
Vimu5g00213 488 PANTHER IMIDAZOLONEPROPIONASE 223 487 - -
Vimu5g00213 488 SUPERFAMILY Metallo-dependent hydrolases 237 448 IPR032466 -
Vimu5g00213 488 Pfam Amidohydrolase family 223 487 IPR013108 -
Vimu5g00213 488 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 2 82 IPR013103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00213 Vimu-Chr5 1955842 1961720 Transposed