Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00191 ATGGCAGAGTTTGGAAACAGCGCGAATACGACGTCGTCTAGATTCTCCTTCTTCAACCGATCCATGACGACGCTTCGGAAAGAAAAGCCGTCGCAGAAGCCGCCGCAGCTGGACCGATCACTGACGAAGTTAGGAGAATCCCCTCGAGGCGGCGGGAGCGTCGTGAAGAGGCTCTGCAACTTCTTTGAGTCGGCGAAACCTTCGTCTTCGGAACATCAACACCGCCACAACAAACTTAAACCCTCGAAATCGGTCGAAGCATCGGAATCCTCCATCGATTCTCCGGCGAAATTGATCGATTCCTTGCAGGCGATTCGGTTACCGGGGACGGAGGATCGGATCGTGTTGTATTTCACCAGCTTACGCGGTATTAGGAGGACCTTCGAGGATTGCTACGCTGTGAGGATGATATTTCGGGGATTTAGGGTTTGGGTTGACGAGCGTGATATTTCGATGGACGCGAATTACAGAAAGGAGTTGATGAACGTGTTGGGGGAGAATGGTAATGGGAAGAGGAAGGGACACGTGGCGCTTCCTCAGGTGTTCATCAGGGGGCGGCACGTGGGGGGTGCTGACATCATCAAGTACATGTACGAGGTGGGGGAGCTCGGGAAGGTTCTGGAAGGGTTGCCAAGGACAAAGGGTGGGTTTGTGTGCGAGAGTTGTGGAGATGTGAGTGGGAGTAGGAAGGTGTTTGATGAAGATGAAGGGGTGTTGAAGAGGTGTTTGGAGTGTAATGAGAATGGGTTGATAAGTACGAGTTTTGAATCTGGGTTTTGTCTTTGTGAAGCTCAAGTTTTAGATTTTTTGGCACTCTTGTCCAATCAGAATTGGAGTTTCACGTCAGTGACGAAGGTTTGCATTGAAATTAGATCAACGAAGACTGTCATAGTGAAACTCCAATTTGACGTGTTTTTGGTGTTGTTATCTAAACAGAATGGATGTTTCATGGGTGGAATAATGGATTGCATGAAGGATGTCAAACTCAGATTTTGA 996 0.488 MAEFGNSANTTSSRFSFFNRSMTTLRKEKPSQKPPQLDRSLTKLGESPRGGGSVVKRLCNFFESAKPSSSEHQHRHNKLKPSKSVEASESSIDSPAKLIDSLQAIRLPGTEDRIVLYFTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDISMDANYRKELMNVLGENGNGKRKGHVALPQVFIRGRHVGGADIIKYMYEVGELGKVLEGLPRTKGGFVCESCGDVSGSRKVFDEDEGVLKRCLECNENGLISTSFESGFCLCEAQVLDFLALLSNQNWSFTSVTKVCIEIRSTKTVIVKLQFDVFLVLLSKQNGCFMGGIMDCMKDVKLRF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00191 331 MobiDBLite consensus disorder prediction 1 52 - -
Vimu5g00191 331 MobiDBLite consensus disorder prediction 1 38 - -
Vimu5g00191 331 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 46 253 - -
Vimu5g00191 331 MobiDBLite consensus disorder prediction 68 83 - -
Vimu5g00191 331 Gene3D Glutaredoxin 112 212 - -
Vimu5g00191 331 ProSiteProfiles Glutaredoxin domain profile. 102 214 - -
Vimu5g00191 331 CDD GRX_GRX_like 113 251 - -
Vimu5g00191 331 Pfam Glutaredoxin 115 188 IPR002109 -
Vimu5g00191 331 SUPERFAMILY Thioredoxin-like 110 208 IPR036249 -
Vimu5g00191 331 MobiDBLite consensus disorder prediction 66 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00191 Vimu-Chr5 1730624 1731810 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g02039 4 22693403 22694152 Vimu5g00191 5 1730624 1731810 PCT