Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu5g00164 ATGTTTGATTGGAACGACGAAGAGCTTGCTAACATAGTATGGGGTGAGGCTGGCGAGAGTGATGATCATATTGTGCCTTATGAAGAGGCAAGCGAAGATCTTCGTGCTGAGAAAAAATGGAATCAGGAAGCTTCTCCCAGTAAACTGATTGAGCAGAAGAGGACCGAGACTAAAACTGACTTTTATCCAGAAAAGTTGGGAAGCAGTTCCAAATTTGATATTGTTGAGGGTCAATCTGCCTCAGAATCTGGCACAAACTCATGGCCTGACTTGTCTTTATCCAGTGCAGCTAAAACTGATCAGGGTTCCTGGGGTGCTGAAGTATCGAAAAATTTAGGTGTGACAGAAGAGACTACGCAGTTAGAAAAGGACGTAGAAAAGCAAGGTGAATTTGCCAACATTGCTTGGGATAACATAGGAAGCTTTGATGATCTAGATCGAATTTTCAGCAATGATGACCCTATATTTGGCCACGTAAGTCTTGAGAATTCTTCTGAGTTGTGGTCTTCCAAAGACACGAGTAACTGTTCAGTACCCATACACTTGGAAGCACCGCACCAAGCAAGTGCTTTAAGGAACAACTCCGAGCCCTTGGAAATTAAAACAGAATATGTTCAACCGAATGGTCAATCATTTTCCCCTTCATTTAAGAGGATTGACGATGCTTCATCTCATGACATTCAAAATGCTCCCGGAAAGACATTCAATGTAGGATATTCTAGAGATAGAATTACTCCCGCTGAAAAGGAGCAACAGGAATTTGGGCAAAAGAATAATCAGTTGAAAGCTCGGAAAAAATCACAAGGTAAAAAAGATGGAAAAGCATTCCAGGAGTTTTATGGTAGCTGGTCTCCCTCATCGACCACATCTGGAAAGTTTCAGAATCAGCTGGGGTCTTCAGTCATGCAGTCTTCCCCCGCTTCTATACTTGGGCAGCAAAACCAGCTTCAAGGACCTGAGACAATATACCTGGACATCACAAATACATATATATCACCCCCTGCATATGGGAGCCTTGCAAATACATATTCTTCTATTTCAGTGCAACCACCAGCTCAGTCAGGAGGAGTTCTTATGCAACAGCCTGCCCTTTCTGGGTATGAAGCATCTCTTGGTGTAATGAATCCTGTGAACAAGTCTGTGGGCTTAGTGAAGCCTCTCACTATGACTCCCCAGGAAAAAATTGAAAAATTAAGGAGGCGGCAGCAAATGCAGGCAATGCTTGCTATTCAGAAACAACAGAAAGAATTTGGTCATCAAGTTCTTAACACTAATAAATCAATTAATAAAAGATGTGCCATAGAAATGAATAATCAACATTTTGATGGAGCTGATCCTGAGATTGAAGATTTAAGAACTCTTTCAACTCTAGATCTACCAACTGAGCAAGATGATTGTAGTACAATATCTTCGGCAATTGATGGTCATTTTGTTGAAGACACAATTCTGTATATGCTTCAGGATGCGATATCAAAGTTAGATGTCAAAATAAGACTCTGCATTAGAGATAGCTTGTTCCGGTTGGCACAAAGTGCAATGCTAAGGAATTGTGCAAGTGATACAAGCAGTACAAACAACAGTAGCAGGGAAGTAATTTTAGCTGTTGCCAGAGAAGAAAGCAGTAGCCAAAACAGATATGGCAGGACTACTGATGTTGAAACGAAGACAAATCCCATTGATCGAACTGTGGCGCATTTGCTCTTTCACAGGCCTTTGGAGTTAACTGAGAATCATTCTGATAAACTGGAGTCACCTATTTCTGCGAAGATACAATTTGAAAGTAAAAAAGCTAACCTGGAGAACTTTCCAGTGGAATGCTTGCCAAACGAGGACTTAAAAGGTAGTCAACAATTTTCTACACAAGGACTTGAGCATCTGCCAGAGGAGCCATTTAAAAACAGTCATTGCGTAGACACTTCAGAAAATGCTAGTGACAATGAGGTAGTTGATGCCGGAGATCAGGTGCTTGAAGCCTCTCAATGA 1983 0.4135 MFDWNDEELANIVWGEAGESDDHIVPYEEASEDLRAEKKWNQEASPSKLIEQKRTETKTDFYPEKLGSSSKFDIVEGQSASESGTNSWPDLSLSSAAKTDQGSWGAEVSKNLGVTEETTQLEKDVEKQGEFANIAWDNIGSFDDLDRIFSNDDPIFGHVSLENSSELWSSKDTSNCSVPIHLEAPHQASALRNNSEPLEIKTEYVQPNGQSFSPSFKRIDDASSHDIQNAPGKTFNVGYSRDRITPAEKEQQEFGQKNNQLKARKKSQGKKDGKAFQEFYGSWSPSSTTSGKFQNQLGSSVMQSSPASILGQQNQLQGPETIYLDITNTYISPPAYGSLANTYSSISVQPPAQSGGVLMQQPALSGYEASLGVMNPVNKSVGLVKPLTMTPQEKIEKLRRRQQMQAMLAIQKQQKEFGHQVLNTNKSINKRCAIEMNNQHFDGADPEIEDLRTLSTLDLPTEQDDCSTISSAIDGHFVEDTILYMLQDAISKLDVKIRLCIRDSLFRLAQSAMLRNCASDTSSTNNSSREVILAVAREESSSQNRYGRTTDVETKTNPIDRTVAHLLFHRPLELTENHSDKLESPISAKIQFESKKANLENFPVECLPNEDLKGSQQFSTQGLEHLPEEPFKNSHCVDTSENASDNEVVDAGDQVLEASQ 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu5g00164 660 PANTHER PROTEIN LNK1 8 608 IPR039928 GO:0006355|GO:0007623
Vimu5g00164 660 MobiDBLite consensus disorder prediction 72 111 - -
Vimu5g00164 660 MobiDBLite consensus disorder prediction 248 272 - -
Vimu5g00164 660 MobiDBLite consensus disorder prediction 615 660 - -
Vimu5g00164 660 MobiDBLite consensus disorder prediction 36 111 - -
Vimu5g00164 660 MobiDBLite consensus disorder prediction 36 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu5g00164 Vimu-Chr5 1365721 1374996 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g02026 4 22600759 22605745 Vimu5g00164 5 1365721 1374996 PCT